RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 CRELD1Q96HD1 420 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 RBM41Q96IZ5 413 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 SERPINB11Q96P15 392 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 SYNCQ9H7C4 482 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 FAM114A2Q9NRY5 505 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 SMARCAL1Q9NZC9 954 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 PCYOX1Q9UHG3 505 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 DMGDHQ9UI17 866 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 CA5BQ9Y2D0 317 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 UTP11Q9Y3A2 253 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 CELSR3Q9NYQ7 3312 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 HELZ2Q9BYK8 2649 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 A0A1W2PPC4 97 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 A0A1W2PR77 199 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 TMEM8BA6NDV4 472 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 KCNU1A8MYU2 1149 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 RAD51CO43502 376 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 KRT7P08729 469 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 ZNF883P0CG24 379 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 KRT3P12035 628 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 DRD3P35462 400 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 GRIA4P48058 902 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 ST8SIA6P61647 398 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 YWHAZP63104 245 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 ECT2LQ008S8 904 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 GUCY2DQ02846 1103 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 BNIP3Q12983 259 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 DNAJC3Q13217 504 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 CASP8Q14790 479 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 HADHQ16836 314 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 C2CD6Q53TS8 623 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 C6orf132Q5T0Z8 1188 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 ARTNQ5T4W7 220 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 CXorf57Q6NSI4 855 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 FBXL22Q6P050 247 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 IL27RAQ6UWB1 636 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 DHRS13Q6UX07 377 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 KLHL7Q8IXQ5 586 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 OR14C36Q8NHC7 312 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 GRK7Q8WTQ7 553 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 FRS2Q8WU20 508 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 KRT35Q92764 455 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 ALG14Q96F25 216 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 FRMD8P1Q9BZ68 369 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 LRRC19Q9H756 370 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 POPDC2Q9HBU9 364 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 SGK2Q9HBY8 427 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 KIAA1522Q9P206 1035 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 APOBEC2Q9Y235 224 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 EFR3BQ9Y2G0 817 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 RAXQ9Y2V3 346 aa9.59□□□□□ -0.87
TMEM39A-208ENST00000486159 LAMA5O15230 3695 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 KNL1Q8NG31 2342 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 A0A1B0GTQ1 180 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 CNTN5O94779 1100 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 SEC31AO94979 1220 aaKnown RBP9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 MT-CO1P00395 513 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 IL1BP01584 269 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 ASLP04424 464 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 GLI1P08151 1106 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 PYGMP11217 842 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 MAT2AP31153 395 aaKnown RBP9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 RDXP35241 583 aaKnown RBP9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 ACADSBP45954 432 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 ADPRHP54922 357 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 RNASE9P60153 205 aaKnown RBP9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 DR1Q01658 176 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 ZBTB16Q05516 673 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 CYP4F3Q08477 520 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 AUHQ13825 339 aaKnown RBP9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 HNRNPDQ14103 355 aaKnown RBP9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 TEAD4Q15561 434 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 COL28A1Q2UY09 1125 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 TTC31Q49AM3 519 aaPredicted RBP9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 PTPN20Q4JDL3 420 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 RAB6CQ53S08 254 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 ALS2CLQ60I27 953 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 OR6B2Q6IFH4 312 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 ARCQ7LC44 396 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 TMPRSS7Q7RTY8 843 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 ADAT2Q7Z6V5 191 aaKnown RBP9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 SPATS2Q86XZ4 545 aaKnown RBP9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 XYLT1Q86Y38 959 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 MREGQ8N565 214 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 KLK6Q92876 244 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 BTBD6Q96KE9 485 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 SLC2A13Q96QE2 648 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 OMDQ99983 421 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 DDX50Q9BQ39 737 aaKnown RBP9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 AP1M1Q9BXS5 423 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 RAB6CQ9H0N0 254 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 DDX47Q9H0S4 455 aaKnown RBP9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 PCED1AQ9H1Q7 454 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 FAM204AQ9H8W3 233 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 EPB41L5Q9HCM4 733 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 MED4Q9NPJ6 270 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 AASDHPPTQ9NRN7 309 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 DDIT4Q9NX09 232 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 VANGL2Q9ULK5 521 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms