RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 NBNO60934 754 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 SERPINI2O75830 405 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 CTPS1P17812 591 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 C21orf33P30042 268 aaPredicted RBP4.08□□□□□ -1.76
VPS41-213ENST00000485955 GRK6P43250 576 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 CENPAP49450 140 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 CXCR3P49682 368 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
VPS41-213ENST00000485955 ERVFC1-1P60608 527 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 TUBA1BP68363 451 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 GOLGA8FQ08AF8 430 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 FAM27E3Q08E93 113 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 BIRC2Q13490 618 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 HLFQ16534 295 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 PLEKHO1Q53GL0 409 aaPredicted RBP4.08□□□□□ -1.76
VPS41-213ENST00000485955 NCAPH2Q6IBW4 605 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 ADGRF5Q8IZF2 1346 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 TCP11L2Q8N4U5 519 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 DNAAF1Q8NEP3 725 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 HSPH1Q92598 858 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 TXNDC15Q96J42 360 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 COG8Q96MW5 612 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 ARPC5LQ9BPX5 153 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.08□□□□□ -1.76
VPS41-213ENST00000485955 LMAN2LQ9H0V9 348 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 DDX31Q9H8H2 851 aaKnown RBP4.08□□□□□ -1.76
VPS41-213ENST00000485955 TMEM51Q9NW97 253 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 CNPY2Q9Y2B0 182 aa4.08□□□□□ -1.76
VPS41-213ENST00000485955 ANP32CO43423 234 aa4.07□□□□□ -1.76
VPS41-213ENST00000485955 OS9Q13438 667 aaPredicted RBP4.07□□□□□ -1.76
VPS41-213ENST00000485955 TYW3Q6IPR3 259 aaKnown RBP4.07□□□□□ -1.76
VPS41-213ENST00000485955 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
VPS41-213ENST00000485955 RETSATQ6NUM9 610 aa4.07□□□□□ -1.76
VPS41-213ENST00000485955 SPSB3Q6PJ21 355 aa4.07□□□□□ -1.76
VPS41-213ENST00000485955 H1FNTQ75WM6 255 aaPredicted RBP4.07□□□□□ -1.76
VPS41-213ENST00000485955 CUZD1Q86UP6 607 aa4.07□□□□□ -1.76
VPS41-213ENST00000485955 PGBD5Q8N414 524 aa4.07□□□□□ -1.76
VPS41-213ENST00000485955 NKAPQ8N5F7 415 aaKnown RBP4.07□□□□□ -1.76
VPS41-213ENST00000485955 SPATA3Q8NHX4 192 aa4.07□□□□□ -1.76
VPS41-213ENST00000485955 WFIKKN2Q8TEU8 576 aa4.07□□□□□ -1.76
VPS41-213ENST00000485955 DNASE2BQ8WZ79 361 aa4.07□□□□□ -1.76
VPS41-213ENST00000485955 CCT6BQ92526 530 aa4.07□□□□□ -1.76
VPS41-213ENST00000485955 GAREM1Q9H706 876 aa4.07□□□□□ -1.76
VPS41-213ENST00000485955 A0A087WYN8 130 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 VWA3AA6NCI4 1184 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 KLK10O43240 276 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 DDNO94850 711 aaPredicted RBP4.06□□□□□ -1.76
VPS41-213ENST00000485955 VNN2O95498 520 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 CHRM4P08173 479 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 CNPP09543 421 aaKnown RBP4.06□□□□□ -1.76
VPS41-213ENST00000485955 WEE2P0C1S8 567 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 LIFRP42702 1097 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 ARL4CP56559 192 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 SF3B4Q15427 424 aaKnown RBP eCLIP4.06□□□□□ -1.76
VPS41-213ENST00000485955 KIF19Q2TAC6 998 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 ADCK5Q3MIX3 580 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 FAM76BQ5HYJ3 339 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 ANKRD45Q5TZF3 282 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 PRSS45Q7RTY3 260 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 CHD1LQ86WJ1 897 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 C2CD5Q86YS7 1000 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 DENND6AQ8IWF6 608 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 MB21D2Q8IYB1 491 aaPredicted RBP4.06□□□□□ -1.76
VPS41-213ENST00000485955 ZNF114Q8NC26 417 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 ZMIZ2Q8NF64 920 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 LILRB1Q8NHL6 650 aaPredicted RBP4.06□□□□□ -1.76
VPS41-213ENST00000485955 GDPD5Q8WTR4 605 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 TRIB2Q92519 343 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 STAMQ92783 540 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 RNF183Q96D59 192 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 SLC32A1Q9H598 525 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 RASSF1Q9NS23 344 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 GDAQ9Y2T3 454 aa4.06□□□□□ -1.76
VPS41-213ENST00000485955 A0A0U1RQJ8 604 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 SH2D7A6NKC9 451 aaPredicted RBP4.05□□□□□ -1.76
VPS41-213ENST00000485955 PEX12O00623 359 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 TCEA3O75764 348 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 MYF6P23409 242 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 RYKP34925 604 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 HYAL1Q12794 435 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 MYBPHQ13203 477 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 SLC39A14Q15043 492 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 SETMARQ53H47 684 aaPredicted RBP4.05□□□□□ -1.76
VPS41-213ENST00000485955 IL20RBQ6UXL0 311 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 MOB3CQ70IA8 216 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 AADATQ8N5Z0 425 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 ARRDC2Q8TBH0 407 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 TMEM170AQ8WVE7 144 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 RAB40AQ8WXH6 277 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 NOD2Q9HC29 1040 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 ENTPD7Q9NQZ7 604 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 SPATS2LQ9NUQ6 558 aaKnown RBP4.05□□□□□ -1.76
VPS41-213ENST00000485955 ANKRD10Q9NXR5 420 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 PCDHGB3Q9Y5G1 929 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 COMMD10Q9Y6G5 202 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 WDR81Q562E7 1941 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 TAF1P21675 1872 aa4.05□□□□□ -1.76
VPS41-213ENST00000485955 PLSCR5A0PG75 271 aa4.04□□□□□ -1.76
VPS41-213ENST00000485955 PER2O15055 1255 aa4.04□□□□□ -1.76
VPS41-213ENST00000485955 IRAK2O43187 625 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms