RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 P3H4Q92791 437 aa12□□□□□ -0.49
HPS4-214ENST00000485842 FOXJ1Q92949 421 aa12□□□□□ -0.49
HPS4-214ENST00000485842 ZNF419Q96HQ0 510 aaPredicted RBP12□□□□□ -0.49
HPS4-214ENST00000485842 HES6Q96HZ4 224 aa12□□□□□ -0.49
HPS4-214ENST00000485842 LRIG1Q96JA1 1093 aa12□□□□□ -0.49
HPS4-214ENST00000485842 OLFM3Q96PB7 478 aa12□□□□□ -0.49
HPS4-214ENST00000485842 TSGA13Q96PP4 275 aa12□□□□□ -0.49
HPS4-214ENST00000485842 PSKH2Q96QS6 385 aa12□□□□□ -0.49
HPS4-214ENST00000485842 OSBPL1AQ9BXW6 950 aa12□□□□□ -0.49
HPS4-214ENST00000485842 ARRDC1-AS1Q9H2J1 176 aa12□□□□□ -0.49
HPS4-214ENST00000485842 C6orf106Q9H6K1 298 aaPredicted RBP12□□□□□ -0.49
HPS4-214ENST00000485842 TRMT1Q9NXH9 659 aaKnown RBP12□□□□□ -0.49
HPS4-214ENST00000485842 GPR179Q6PRD1 2367 aa12□□□□□ -0.49
HPS4-214ENST00000485842 TBC1D3DA0A087WVF3 549 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 TBC1D3IA0A087WXS9 549 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 TBC1D3EA0A087X179 549 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 TBC1D3KA0A087X1G2 549 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 TBC1D3FA6NER0 549 aaPredicted RBP11.99□□□□□ -0.49
HPS4-214ENST00000485842 LRRC72A6NJI9 287 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 C16orf96A6NNT2 1141 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 TBC1D3LB9A6J9 549 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 KCNK1O00180 336 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 FSBPO95073 299 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 RETP07949 1114 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 TBC1D3HP0C7X1 549 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 CCNB1P14635 433 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 ITPKAP23677 461 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 PTPN7P35236 360 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 NR2C2P49116 596 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 NEK3P51956 506 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 AP1S1P61966 158 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 ITKQ08881 620 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 RPS6KA1Q15418 735 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 CCDC6Q16204 474 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 ZNF805Q5CZA5 627 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 LRRC73Q5JTD7 316 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 CFAP58Q5T655 872 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 SEL1L2Q5TEA6 688 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 MEI1Q5TIA1 1274 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 TBC1D3GQ6DHY5 549 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 TBC1D3CQ6IPX1 549 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 FBXL19Q6PCT2 694 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 NCEH1Q6PIU2 408 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 BZW1Q7L1Q6 419 aaKnown RBP11.99□□□□□ -0.49
HPS4-214ENST00000485842 RGL4Q8IZJ4 473 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 TBC1D3Q8IZP1 549 aaPredicted RBP11.99□□□□□ -0.49
HPS4-214ENST00000485842 PGBD5Q8N414 524 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 DCLK2Q8N568 766 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 OR2T34Q8NGX1 318 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 MAML1Q92585 1016 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 RUBCNQ92622 972 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 PIGKQ92643 395 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 LOXL4Q96JB6 756 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 MGME1Q9BQP7 344 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 CEP41Q9BYV8 373 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 ATP13A3Q9H7F0 1226 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 SCUBE2Q9NQ36 999 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 RBM22Q9NW64 420 aaKnown RBP eCLIP11.99□□□□□ -0.49
HPS4-214ENST00000485842 PYCARDQ9ULZ3 195 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 RALGAPA1Q6GYQ0 2036 aa11.99□□□□□ -0.49
HPS4-214ENST00000485842 BCLAF3A2AJT9 711 aaKnown RBP11.98□□□□□ -0.49
HPS4-214ENST00000485842 H7C0C1 242 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 APOC4-APOC2K7ER74 178 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 SLC7A4O43246 635 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 PLRG1O43660 514 aaKnown RBP11.98□□□□□ -0.49
HPS4-214ENST00000485842 JCHAINP01591 159 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 APOC2P02655 101 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 HLA-DQB2P05538 268 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 ADRB3P13945 408 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 XPAP23025 273 aaPredicted RBP11.98□□□□□ -0.49
HPS4-214ENST00000485842 MAOBP27338 520 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 SERPINA4P29622 427 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 MPLP40238 635 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 MAPK8P45983 427 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 ATP5OP48047 213 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 CSNK1DP48730 415 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 PPP2CBP62714 309 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 PPP2CAP67775 309 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 OTUD4Q01804 1114 aaKnown RBP11.98□□□□□ -0.49
HPS4-214ENST00000485842 BCL2L1Q07817 233 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 CCDC15Q0P6D6 951 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 ZBTB17Q13105 803 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 HNRNPDQ14103 355 aaKnown RBP11.98□□□□□ -0.49
HPS4-214ENST00000485842 GRM3Q14832 879 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 SPDYCQ5MJ68 293 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 FAM182AQ5T1J6 154 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 KIAA0895LQ68EN5 471 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 CAMK1DQ8IU85 385 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 REXO1L1PQ8IX06 675 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 CADM4Q8NFZ8 388 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 ACTL9Q8TC94 416 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 TFB1MQ8WVM0 346 aaKnown RBP11.98□□□□□ -0.49
HPS4-214ENST00000485842 FAM131CQ96AQ9 280 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 VOPP1Q96AW1 172 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 NUDCD1Q96RS6 583 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 TUBGCP5Q96RT8 1024 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 FAM118BQ9BPY3 351 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 HDAC8Q9BY41 377 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 CPEB1Q9BZB8 566 aaKnown RBP11.98□□□□□ -0.49
HPS4-214ENST00000485842 POLR1EQ9GZS1 481 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms