RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 STARD3Q14849 445 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 PTPRRQ15256 657 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 DLG2Q15700 870 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 ELF2Q15723 593 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 TAZQ16635 292 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 KCTD19Q17RG1 926 aaPredicted RBP5.83□□□□□ -1.48
CUX1-208ENST00000485792 SMTNL2Q2TAL5 461 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 FNDC3BQ53EP0 1204 aaKnown RBP5.83□□□□□ -1.48
CUX1-208ENST00000485792 BOLA3Q53S33 107 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 TPRG1LQ5T0D9 272 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 AGBL4Q5VU57 503 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 RNF219Q5W0B1 726 aaPredicted RBP5.83□□□□□ -1.48
CUX1-208ENST00000485792 DCUN1D2Q6PH85 259 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 RAD9BQ6WBX8 426 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 PRR23CQ6ZRP0 262 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 POLNQ7Z5Q5 900 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 VPS36Q86VN1 386 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 SYT12Q8IV01 421 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 CNGA4Q8IV77 575 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 TMEFF1Q8IYR6 380 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 CASKIN2Q8WXE0 1202 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 PRCCQ92733 491 aaPredicted RBP5.83□□□□□ -1.48
CUX1-208ENST00000485792 FATE1Q969F0 183 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 COL26A1Q96A83 441 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 ZNF653Q96CK0 615 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 FAF2Q96CS3 445 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 TBC1D31Q96DN5 1066 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 TOE1Q96GM8 510 aaKnown RBP5.83□□□□□ -1.48
CUX1-208ENST00000485792 SMIM14Q96QK8 99 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 ARRDC1-AS1Q9H2J1 176 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 PABPC3Q9H361 631 aaKnown RBP5.83□□□□□ -1.48
CUX1-208ENST00000485792 C6orf106Q9H6K1 298 aaPredicted RBP5.83□□□□□ -1.48
CUX1-208ENST00000485792 NHEJ1Q9H9Q4 299 aaPredicted RBP5.83□□□□□ -1.48
CUX1-208ENST00000485792 SGK2Q9HBY8 427 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 CWC15Q9P013 229 aaKnown RBP5.83□□□□□ -1.48
CUX1-208ENST00000485792 RCOR3Q9P2K3 495 aaPredicted RBP5.83□□□□□ -1.48
CUX1-208ENST00000485792 LHX3Q9UBR4 397 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 TRIM10Q9UDY6 481 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 GMEB2Q9UKD1 530 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 USP18Q9UMW8 372 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 CYP8B1Q9UNU6 501 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 HYOU1Q9Y4L1 999 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 KMT2BQ9UMN6 2715 aaPredicted RBP5.83□□□□□ -1.48
CUX1-208ENST00000485792 CFAP47Q6ZTR5 3102 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 USP24Q9UPU5 2620 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 ZSCAN5CA6NGD5 496 aaPredicted RBP5.82□□□□□ -1.48
CUX1-208ENST00000485792 SOWAHDA6NJG2 315 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 AKR1B15C9JRZ8 316 aaPredicted RBP5.82□□□□□ -1.48
CUX1-208ENST00000485792 SLC30A4O14863 429 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 CASC3O15234 703 aaKnown RBP5.82□□□□□ -1.48
CUX1-208ENST00000485792 MID1O15344 667 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 INSIG1O15503 277 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 SLC7A4O43246 635 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 PLRG1O43660 514 aaKnown RBP5.82□□□□□ -1.48
CUX1-208ENST00000485792 MFSD11O43934 449 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 SYNCRIPO60506 623 aaKnown RBP5.82□□□□□ -1.48
CUX1-208ENST00000485792 SRGAP2O75044 1071 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 PROSCO94903 275 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 RHOCP08134 193 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 SERPINF2P08697 491 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 H2AFZP0C0S5 128 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 VSIG8P0DPA2 414 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 RARAP10276 462 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 GOT1P17174 413 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 ITIH2P19823 946 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 PSMA2P25787 234 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 MAOBP27338 520 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 SLC8A1P32418 973 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 MAN1A1P33908 653 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 ARHGAP25P42331 645 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 CSNK1DP48730 415 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 CCR5P51681 352 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 ST8SIA6P61647 398 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 KRT83P78385 493 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 LMNB2Q03252 620 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 SHBQ15464 509 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 CST6Q15828 149 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 POM121L1PQ3SYA9 428 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 PARP15Q460N3 678 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 EFHC2Q5JST6 749 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 CCDC122Q5T0U0 273 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 PIP5KL1Q5T9C9 394 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 ZNF776Q68DI1 518 aaPredicted RBP5.82□□□□□ -1.48
CUX1-208ENST00000485792 RETSATQ6NUM9 610 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 C22orf39Q6P5X5 142 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 PRR23BQ6ZRT6 265 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 RFX8Q6ZV50 586 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 H2AFVQ71UI9 128 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 CEP68Q76N32 757 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 LPCAT2Q7L5N7 544 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.82□□□□□ -1.48
CUX1-208ENST00000485792 KIAA2013Q8IYS2 634 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 CCDC170Q8IYT3 715 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 PELI3Q8N2H9 469 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 STK40Q8N2I9 435 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 PGBD5Q8N414 524 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 PCDH20Q8N6Y1 951 aaKnown RBP5.82□□□□□ -1.48
CUX1-208ENST00000485792 PQLC3Q8N755 202 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 OR6K2Q8NGY2 324 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 HCAR2Q8TDS4 363 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms