RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 DFNA5O60443 496 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 MFAP3LO75121 409 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 IGSF6O95976 241 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 AMPD1P23109 780 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 ABL2P42684 1182 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 CCT8P50990 548 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 ZNF135P52742 658 aaPredicted RBP13.08□□□□□ -0.32
HDAC1-209ENST00000484305 NXPH1P58417 271 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 SHC2P98077 582 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 SLC25A11Q02978 314 aaKnown RBP13.08□□□□□ -0.32
HDAC1-209ENST00000484305 SUZ12Q15022 739 aaKnown RBP13.08□□□□□ -0.32
HDAC1-209ENST00000484305 SHBQ15464 509 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 TMEM259Q4ZIN3 620 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 GDPD4Q6W3E5 623 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 ARHGAP36Q6ZRI8 547 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 CPNE8Q86YQ8 564 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 TMEM145Q8NBT3 493 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 BAHD1Q8TBE0 780 aaPredicted RBP13.08□□□□□ -0.32
HDAC1-209ENST00000484305 ZNF564Q8TBZ8 553 aaPredicted RBP13.08□□□□□ -0.32
HDAC1-209ENST00000484305 RHBDD1Q8TEB9 315 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 EXOC2Q96KP1 924 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 ELF4Q99607 663 aaPredicted RBP13.08□□□□□ -0.32
HDAC1-209ENST00000484305 CHP1Q99653 195 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 GDF3Q9NR23 364 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 ABHD10Q9NUJ1 306 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.08□□□□□ -0.32
HDAC1-209ENST00000484305 ETNK2Q9NVF9 386 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 GGT7Q9UJ14 662 aa13.08□□□□□ -0.32
HDAC1-209ENST00000484305 ACACBO00763 2458 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 CHD8Q9HCK8 2581 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 LRRK1Q38SD2 2015 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 SSU72P8A0A1W2PR75 194 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 H3BRJ5 948 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 SPINT1O43278 529 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 SPINK2P20155 84 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 ARL4AP40617 200 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 RPS21P63220 83 aaKnown RBP13.07□□□□□ -0.32
HDAC1-209ENST00000484305 RAD51Q06609 339 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 FGL2Q14314 439 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 LRRC73Q5JTD7 316 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 IQCHQ86VS3 1027 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 GATAD2AQ86YP4 633 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 TEKT4Q8WW24 435 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 FEM1CQ96JP0 617 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 CSPG4P5Q96PW8 444 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 OSBPL1AQ9BXW6 950 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 SLC17A9Q9BYT1 436 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 CPEB1Q9BZB8 566 aaKnown RBP13.07□□□□□ -0.32
HDAC1-209ENST00000484305 DEF6Q9H4E7 631 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 PCDH18Q9HCL0 1135 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 ZNHIT6Q9NWK9 470 aaKnown RBP13.07□□□□□ -0.32
HDAC1-209ENST00000484305 CTTNBP2NLQ9P2B4 639 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 ITM2BQ9Y287 266 aa13.07□□□□□ -0.32
HDAC1-209ENST00000484305 IGLON5A6NGN9 336 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 TSPAN6O43657 245 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 AKR1B10O60218 316 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 PALMO75781 387 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 PIGNO95427 931 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 PAK4O96013 591 aaPredicted RBP13.06□□□□□ -0.32
HDAC1-209ENST00000484305 TPM1P09493 284 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 H2AFZP0C0S5 128 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 FTH1P19P0C7X4 201 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 THEGLP0DJG4 465 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 ITIH2P19823 946 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 HNRNPA2B1P22626 353 aaKnown RBP13.06□□□□□ -0.32
HDAC1-209ENST00000484305 AKT2P31751 481 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 SSR1P43307 286 aaKnown RBP13.06□□□□□ -0.32
HDAC1-209ENST00000484305 RGRP47804 291 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 CLDN2P57739 230 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 OVGP1Q12889 678 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 TBX2Q13207 712 aaPredicted RBP13.06□□□□□ -0.32
HDAC1-209ENST00000484305 TSR1Q2NL82 804 aaKnown RBP13.06□□□□□ -0.32
HDAC1-209ENST00000484305 ATP13A4Q4VNC1 1196 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 KIAA1161Q6NSJ0 714 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 H2AFVQ71UI9 128 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 GLRX5Q86SX6 157 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 TTC7BQ86TV6 843 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 SLCO6A1Q86UG4 719 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 LZTR1Q8N653 840 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 PNPLA1Q8N8W4 532 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 TSEN2Q8NCE0 465 aaKnown RBP13.06□□□□□ -0.32
HDAC1-209ENST00000484305 CTNNBL1Q8WYA6 563 aaPredicted RBP13.06□□□□□ -0.32
HDAC1-209ENST00000484305 TSC1Q92574 1164 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 RAB7BQ96AH8 199 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 KLHDC7BQ96G42 594 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 SCNM1Q9BWG6 230 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 ERVMER34-1Q9H9K5 563 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 SP110Q9HB58 689 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 SPTLC3Q9NUV7 552 aa13.06□□□□□ -0.32
HDAC1-209ENST00000484305 IPO11Q9UI26 975 aaKnown RBP13.06□□□□□ -0.32
HDAC1-209ENST00000484305 ARID1BQ8NFD5 2236 aaPredicted RBP13.06□□□□□ -0.32
HDAC1-209ENST00000484305 NEMP1O14524 444 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 AREL1O15033 823 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 RAD51BO15315 384 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 HYAL3O43820 417 aaPredicted RBP13.05□□□□□ -0.32
HDAC1-209ENST00000484305 BUB1BO60566 1050 aaPredicted RBP13.05□□□□□ -0.32
HDAC1-209ENST00000484305 MAGEC1O60732 1142 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 PROSCO94903 275 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 CD48P09326 243 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 TMEM253P0C7T8 217 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms