RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 APOBEC3BQ9UH17 382 aaKnown RBP13.1□□□□□ -0.31
UBR4-213ENST00000483922 PCDHGA7Q9Y5G6 932 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 TEX15Q9BXT5 2789 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 PSMA7O14818 248 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 PLD2O14939 933 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 AREL1O15033 823 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 TSPAN6O43657 245 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 SRGAP2O75044 1071 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 FAM87AP0C7U9 286 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 PNMA6AP0CW24 399 aaPredicted RBP13.09□□□□□ -0.31
UBR4-213ENST00000483922 OR1E1P30953 314 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 ACVRL1P37023 503 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 RNASE9P60153 205 aaKnown RBP13.09□□□□□ -0.31
UBR4-213ENST00000483922 CYP4F2P78329 520 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 SGCGQ13326 291 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 TCEA2Q15560 299 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 BRMS1LQ5PSV4 323 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 DPY19L2P1Q6NXN4 242 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 TRIM65Q6PJ69 517 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 LEKR1Q6ZMV7 388 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 TMPRSS9Q7Z410 1059 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 PCDH20Q8N6Y1 951 aaKnown RBP13.09□□□□□ -0.31
UBR4-213ENST00000483922 KYQ8NBH2 561 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 TP53I13Q8NBR0 393 aaPredicted RBP13.09□□□□□ -0.31
UBR4-213ENST00000483922 NETO2Q8NC67 525 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 BTN2A2Q8WVV5 523 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 NELFBQ8WX92 580 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 HTR3CQ8WXA8 447 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 PPP1R16AQ96I34 528 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 SRRTQ9BXP5 876 aaKnown RBP13.09□□□□□ -0.31
UBR4-213ENST00000483922 TM6SF2Q9BZW4 377 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 ZDHHC6Q9H6R6 413 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 ATP13A1Q9HD20 1204 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 EVA1BQ9NVM1 165 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 GULP1Q9UBP9 304 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 ACSL6Q9UKU0 697 aa13.09□□□□□ -0.31
UBR4-213ENST00000483922 AGRPO00253 132 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 FOXN3O00409 490 aaPredicted RBP13.08□□□□□ -0.32
UBR4-213ENST00000483922 MMP20O60882 483 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 SMC2O95347 1197 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 ITIH1P19827 911 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 FLT3P36888 993 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 EIF4A3P38919 411 aaKnown RBP13.08□□□□□ -0.32
UBR4-213ENST00000483922 USP8P40818 1118 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 ETV5P41161 510 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 MLLT3P42568 568 aaPredicted RBP13.08□□□□□ -0.32
UBR4-213ENST00000483922 RECQLP46063 649 aaPredicted RBP13.08□□□□□ -0.32
UBR4-213ENST00000483922 SULT1E1P49888 294 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 GNA12Q03113 381 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 SLC20A2Q08357 652 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 MTA1Q13330 715 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 MORC3Q14149 939 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 SPIDRQ14159 915 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 TBR1Q16650 682 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 C2CD6Q53TS8 623 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 FOXR2Q6PJQ5 311 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 RAB11FIP2Q7L804 512 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 SLC47A2Q86VL8 602 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 VPS36Q86VN1 386 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 PLPP6Q8IY26 295 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 FBXO39Q8N4B4 442 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 DENND6BQ8NEG7 585 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 TSACCQ96A04 125 aaPredicted RBP13.08□□□□□ -0.32
UBR4-213ENST00000483922 CCDC74AQ96AQ1 378 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 SGF29Q96ES7 293 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 FAM117AQ9C073 453 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 EPB41L5Q9HCM4 733 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 SIX2Q9NPC8 291 aa13.08□□□□□ -0.32
UBR4-213ENST00000483922 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.08□□□□□ -0.32
UBR4-213ENST00000483922 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.08□□□□□ -0.32
UBR4-213ENST00000483922 DOCK4Q8N1I0 1966 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 SCN8AQ9UQD0 1980 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 FAM72CH0Y354 149 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 GJB6O95452 261 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 ANXA6P08133 673 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 YPEL5P62699 121 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 DEUP1Q05D60 604 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 CLCA4Q14CN2 919 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 ZNF805Q5CZA5 627 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 FAXCQ5TGI0 409 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 FAM72AQ5TYM5 149 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 FAM72DQ6L9T8 149 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 RETSATQ6NUM9 610 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 LRRC31Q6UY01 552 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 USP53Q70EK8 1073 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 VASH2Q86V25 355 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 FAM72BQ86X60 149 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 ZFAND4Q86XD8 727 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 SDR16C5Q8N3Y7 309 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 ARHGEF2Q92974 986 aaKnown RBP13.07□□□□□ -0.32
UBR4-213ENST00000483922 NAT6Q93015 286 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 ISG20Q96AZ6 181 aaKnown RBP13.07□□□□□ -0.32
UBR4-213ENST00000483922 TBATAQ96M53 351 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 TIGD1Q96MW7 591 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 KLHL32Q96NJ5 620 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 SYNDIG1Q9H7V2 258 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 WDR70Q9NW82 654 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.07□□□□□ -0.32
UBR4-213ENST00000483922 FOXJ2Q9P0K8 574 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 SIRPGQ9P1W8 387 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms