RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 FRMD1Q8N878 549 aa18.05■□□□□ 0.48
CPNE1-224ENST00000483359 CCDC110Q8TBZ0 833 aa18.05■□□□□ 0.48
CPNE1-224ENST00000483359 NUDCD1Q96RS6 583 aa18.05■□□□□ 0.48
CPNE1-224ENST00000483359 FBXO4Q9UKT5 387 aa18.05■□□□□ 0.48
CPNE1-224ENST00000483359 ATP8A1Q9Y2Q0 1164 aa18.05■□□□□ 0.48
CPNE1-224ENST00000483359 MYO15AQ9UKN7 3530 aa18.05■□□□□ 0.48
CPNE1-224ENST00000483359 ANKRD36A6QL64 1941 aa18.05■□□□□ 0.48
CPNE1-224ENST00000483359 RNASEH2AO75792 299 aaKnown RBP18.04■□□□□ 0.48
CPNE1-224ENST00000483359 ADH1BP00325 375 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 TTC31Q49AM3 519 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-224ENST00000483359 AADATQ8N5Z0 425 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 FAM160A2Q8N612 972 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-224ENST00000483359 PAF1Q8N7H5 531 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 PDCD6IPQ8WUM4 868 aaKnown RBP18.04■□□□□ 0.48
CPNE1-224ENST00000483359 TEKT5Q96M29 485 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 KLHL32Q96NJ5 620 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 FRMD8P1Q9BZ68 369 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-224ENST00000483359 USP29Q9HBJ7 922 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 HAUS2Q9NVX0 235 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 PCDHGC4Q9Y5F7 938 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 H0Y858 1186 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 IFNB1P01574 187 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 SP9P0CG40 484 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 NFKB1P19838 968 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 CD68P34810 354 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-224ENST00000483359 CD86P42081 329 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 TPMTP51580 245 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 AP1S1P61966 158 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 NIPAL4Q0D2K0 466 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 LRRC73Q5JTD7 316 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 FAM46CQ5VWP2 391 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 NCEH1Q6PIU2 408 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 GDPD4Q6W3E5 623 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 PRUNE1Q86TP1 453 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 HDDC3Q8N4P3 179 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 TAB3Q8N5C8 712 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-224ENST00000483359 TMIEQ8NEW7 156 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 NKD2Q969F2 451 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-224ENST00000483359 ARRDC3Q96B67 414 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 OMDQ99983 421 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 PABPC3Q9H361 631 aaKnown RBP18.04■□□□□ 0.48
CPNE1-224ENST00000483359 ATP13A3Q9H7F0 1226 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 FBXL12Q9NXK8 326 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 UBP1Q9NZI7 540 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 VPS13AQ96RL7 3174 aa18.04■□□□□ 0.48
CPNE1-224ENST00000483359 DMDP11532 3685 aa18.03■□□□□ 0.48
CPNE1-224ENST00000483359 EML5Q05BV3 1969 aa18.03■□□□□ 0.48
CPNE1-224ENST00000483359 GOLGA6L10A0A0M3HER8 536 aa18.03■□□□□ 0.48
CPNE1-224ENST00000483359 PDE2AO00408 941 aaPredicted RBP18.03■□□□□ 0.48
CPNE1-224ENST00000483359 STK10O94804 968 aaKnown RBP18.03■□□□□ 0.48
CPNE1-224ENST00000483359 C5AR1P21730 350 aa18.03■□□□□ 0.48
CPNE1-224ENST00000483359 BCL2L1Q07817 233 aa18.03■□□□□ 0.48
CPNE1-224ENST00000483359 SRSF5Q13243 272 aaKnown RBP18.03■□□□□ 0.48
CPNE1-224ENST00000483359 ANKRD20A2Q5SQ80 823 aa18.03■□□□□ 0.48
CPNE1-224ENST00000483359 CFAP58Q5T655 872 aa18.03■□□□□ 0.48
CPNE1-224ENST00000483359 ANKRD20A1Q5TYW2 823 aa18.03■□□□□ 0.48
CPNE1-224ENST00000483359 ANKRD20A3Q5VUR7 823 aa18.03■□□□□ 0.48
CPNE1-224ENST00000483359 ARRDC2Q8TBH0 407 aa18.03■□□□□ 0.48
CPNE1-224ENST00000483359 MAGOHBQ96A72 148 aaKnown RBP18.03■□□□□ 0.48
CPNE1-224ENST00000483359 RBM15Q96T37 977 aaKnown RBP eCLIP18.03■□□□□ 0.482e-7■■■□□ 15.1
CPNE1-224ENST00000483359 VAT1Q99536 393 aa18.03■□□□□ 0.48
CPNE1-224ENST00000483359 DYRK4Q9NR20 520 aa18.03■□□□□ 0.48
CPNE1-224ENST00000483359 AMACRQ9UHK6 382 aa18.03■□□□□ 0.48
CPNE1-224ENST00000483359 RSPH14Q9UHP6 348 aa18.03■□□□□ 0.48
CPNE1-224ENST00000483359 URI1O94763 535 aaPredicted RBP18.02■□□□□ 0.48
CPNE1-224ENST00000483359 SERPINA4P29622 427 aa18.02■□□□□ 0.48
CPNE1-224ENST00000483359 DRD3P35462 400 aa18.02■□□□□ 0.48
CPNE1-224ENST00000483359 CSNK1DP48730 415 aa18.02■□□□□ 0.48
CPNE1-224ENST00000483359 CNTN1Q12860 1018 aa18.02■□□□□ 0.48
CPNE1-224ENST00000483359 IHHQ14623 411 aa18.02■□□□□ 0.48
CPNE1-224ENST00000483359 ALG1LQ6GMV1 187 aa18.02■□□□□ 0.48
CPNE1-224ENST00000483359 TTC27Q6P3X3 843 aa18.02■□□□□ 0.48
CPNE1-224ENST00000483359 PARS2Q7L3T8 475 aaKnown RBP18.02■□□□□ 0.48
CPNE1-224ENST00000483359 LONP2Q86WA8 852 aa18.02■□□□□ 0.48
CPNE1-224ENST00000483359 SPATA22Q8NHS9 363 aa18.02■□□□□ 0.48
CPNE1-224ENST00000483359 PPP1R16AQ96I34 528 aa18.02■□□□□ 0.48
CPNE1-224ENST00000483359 OSBPL1AQ9BXW6 950 aa18.02■□□□□ 0.48
CPNE1-224ENST00000483359 CPEB1Q9BZB8 566 aaKnown RBP18.02■□□□□ 0.48
CPNE1-224ENST00000483359 GLOD4Q9HC38 313 aa18.02■□□□□ 0.48
CPNE1-224ENST00000483359 KIF2AO00139 706 aaPredicted RBP18.02■□□□□ 0.47
CPNE1-224ENST00000483359 MT-CYBP00156 380 aaPredicted RBP18.02■□□□□ 0.47
CPNE1-224ENST00000483359 ETS1P14921 441 aa18.02■□□□□ 0.47
CPNE1-224ENST00000483359 PAFAH1B1P43034 410 aa18.02■□□□□ 0.47
CPNE1-224ENST00000483359 MAPK8P45983 427 aa18.02■□□□□ 0.47
CPNE1-224ENST00000483359 ZBTB16Q05516 673 aa18.02■□□□□ 0.47
CPNE1-224ENST00000483359 TRAF2Q12933 501 aa18.02■□□□□ 0.47
CPNE1-224ENST00000483359 PCSK7Q16549 785 aa18.02■□□□□ 0.47
CPNE1-224ENST00000483359 ZNF805Q5CZA5 627 aa18.02■□□□□ 0.47
CPNE1-224ENST00000483359 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.02■□□□□ 0.47
CPNE1-224ENST00000483359 GSTA5Q7RTV2 222 aa18.02■□□□□ 0.47
CPNE1-224ENST00000483359 PRSS33Q8NF86 280 aa18.02■□□□□ 0.47
CPNE1-224ENST00000483359 LRIG1Q96JA1 1093 aa18.02■□□□□ 0.47
CPNE1-224ENST00000483359 SPATA13Q96N96 652 aa18.02■□□□□ 0.47
CPNE1-224ENST00000483359 TUBGCP5Q96RT8 1024 aa18.02■□□□□ 0.47
CPNE1-224ENST00000483359 SUV39H2Q9H5I1 410 aa18.02■□□□□ 0.47
CPNE1-224ENST00000483359 USP36Q9P275 1121 aaKnown RBP18.02■□□□□ 0.47
CPNE1-224ENST00000483359 CFAP69A5D8W1 941 aa18.01■□□□□ 0.47
CPNE1-224ENST00000483359 ITGAVP06756 1048 aa18.01■□□□□ 0.47
CPNE1-224ENST00000483359 MMP2P08253 660 aa18.01■□□□□ 0.47
CPNE1-224ENST00000483359 SERPINF2P08697 491 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms