RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 OR6K2Q8NGY2 324 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 WDR48Q8TAF3 677 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 BTN2A2Q8WVV5 523 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 GLMNQ92990 594 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 NAT6Q93015 286 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 CENPTQ96BT3 561 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 C1orf74Q96LT6 269 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 TIGD1Q96MW7 591 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 CCDC3Q9BQI4 270 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 SLC13A1Q9BZW2 595 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 TM6SF2Q9BZW4 377 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 TRIM4Q9C037 500 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 CEP44Q9C0F1 390 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 ZDHHC6Q9H6R6 413 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 ATP13A1Q9HD20 1204 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 PLCB1Q9NQ66 1216 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 RRN3Q9NYV6 651 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 GULP1Q9UBP9 304 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 APOBEC3BQ9UH17 382 aaKnown RBP7.51□□□□□ -1.21
CSDE1-206ENST00000483030 IL17BQ9UHF5 180 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 GGT7Q9UJ14 662 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 PNMA8BQ9ULN7 279 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-206ENST00000483030 PCDHGC3Q9UN70 934 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 ITM2BQ9Y287 266 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 FCF1Q9Y324 198 aaKnown RBP7.51□□□□□ -1.21
CSDE1-206ENST00000483030 HEMK1Q9Y5R4 338 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-206ENST00000483030 COL6A6A6NMZ7 2263 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 HECTD1Q9ULT8 2610 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 ATMQ13315 3056 aa7.51□□□□□ -1.21
CSDE1-206ENST00000483030 MYO18BQ8IUG5 2567 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 IGLV3-10A0A075B6K4 115 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 FAM170AA1A519 330 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 BIN1O00499 593 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 KRIT1O00522 736 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 NTN3O00634 580 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-206ENST00000483030 PLD2O14939 933 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 NOBOXO60393 691 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 GJB6O95452 261 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 CD160O95971 181 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 CELA2BP08218 269 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-206ENST00000483030 TSHRP16473 764 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 EIF4A3P38919 411 aaKnown RBP7.5□□□□□ -1.21
CSDE1-206ENST00000483030 MARSP56192 900 aaKnown RBP7.5□□□□□ -1.21
CSDE1-206ENST00000483030 CCL7P80098 99 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 ARF5P84085 180 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 NFKB2Q00653 900 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 GNA12Q03113 381 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 SRSF6Q13247 344 aaKnown RBP7.5□□□□□ -1.21
CSDE1-206ENST00000483030 PTK2BQ14289 1009 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 TCEA2Q15560 299 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 ZNF805Q5CZA5 627 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 C6orf132Q5T0Z8 1188 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 ARTNQ5T4W7 220 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 TMCO4Q5TGY1 634 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 ESRP1Q6NXG1 681 aaKnown RBP7.5□□□□□ -1.21
CSDE1-206ENST00000483030 ZNF783Q6ZMS7 281 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 B3GNT8Q7Z7M8 397 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 TTC7BQ86TV6 843 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 VPS36Q86VN1 386 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 ZSCAN30Q86W11 494 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 JAMLQ86YT9 394 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 DRC7Q8IY82 874 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 DENND6BQ8NEG7 585 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 ASB12Q8WXK4 309 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 SHC3Q92529 594 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 NT5C3BQ969T7 300 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 RAB7BQ96AH8 199 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 PGAP3Q96FM1 320 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-206ENST00000483030 FAM81BQ96LP2 452 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 TBCBQ99426 244 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 ARHGAP9Q9BRR9 750 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 LRRC61Q9BV99 259 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 FOXP3Q9BZS1 431 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 ZYG11BQ9C0D3 744 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 CLPBQ9H078 707 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 EPB41L5Q9HCM4 733 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 SIRPGQ9P1W8 387 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 ZNF212Q9UDV6 495 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 ATXN7L1Q9ULK2 861 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-206ENST00000483030 STAP1Q9ULZ2 295 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 DOLKQ9UPQ8 538 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 PAXBP1Q9Y5B6 917 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 DOCK9Q9BZ29 2069 aa7.5□□□□□ -1.21
CSDE1-206ENST00000483030 TP53BP1Q12888 1972 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-206ENST00000483030 SPTA1P02549 2419 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 NAV2Q8IVL1 2488 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 AGRPO00253 132 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 FOXN3O00409 490 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-206ENST00000483030 MMP20O60882 483 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 FGFR1OPO95684 399 aaKnown RBP7.49□□□□□ -1.21
CSDE1-206ENST00000483030 POP4O95707 220 aaKnown RBP7.49□□□□□ -1.21
CSDE1-206ENST00000483030 UGT2B4P06133 528 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 PNMA6AP0CW24 399 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-206ENST00000483030 CTSEP14091 401 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 HGFP14210 728 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 ITIH2P19823 946 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 PON1P27169 355 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 UGT1A5P35504 534 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 CLCN1P35523 988 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 IGFALSP35858 605 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms