RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 RTP4Q96DX8 246 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 TUT1Q9H6E5 874 aaKnown RBP12.84□□□□□ -0.35
VPS52-218ENST00000482399 ZBTB26Q9HCK0 441 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 SARS2Q9NP81 518 aaKnown RBP12.84□□□□□ -0.35
VPS52-218ENST00000482399 TTC24A2A3L6 582 aaPredicted RBP12.84□□□□□ -0.35
VPS52-218ENST00000482399 AURKAO14965 403 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 LGALS2P05162 132 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 APOA4P06727 396 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 SNRPB2P08579 225 aaKnown RBP12.84□□□□□ -0.35
VPS52-218ENST00000482399 HMGB2P26583 209 aaKnown RBP12.84□□□□□ -0.35
VPS52-218ENST00000482399 ADCYAP1R1P41586 468 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 ACADSBP45954 432 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 RAB10P61026 200 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 IKBKEQ14164 716 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 MAPRE2Q15555 327 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 UGP2Q16851 508 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 SLC25A52Q3SY17 297 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 ZYG11AQ6WRX3 759 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 TFAP2DQ7Z6R9 452 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 FAM35AQ86V20 835 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 CLEC4FQ8N1N0 589 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 TTC39CQ8N584 583 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 KLHL23Q8NBE8 558 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 KBTBD7Q8WVZ9 684 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 PLEKHG4BQ96PX9 1271 aa12.84□□□□□ -0.35
VPS52-218ENST00000482399 RBM22Q9NW64 420 aaKnown RBP eCLIP12.84□□□□□ -0.35
VPS52-218ENST00000482399 PRORSD1PA6NEY8 169 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 TMX2-CTNND1H3BSU7 103 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 GNGT2O14610 69 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 ZNF195O14628 629 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 GRID2O43424 1007 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 GABBR2O75899 941 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 CD151P48509 253 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 VGLL4Q14135 290 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 REP15Q6BDI9 236 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 DPP9Q86TI2 863 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 CEP97Q8IW35 865 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 FAM110BQ8TC76 370 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 TRPM4Q8TD43 1214 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 RHOJQ9H4E5 214 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 CLK4Q9HAZ1 481 aaKnown RBP12.83□□□□□ -0.35
VPS52-218ENST00000482399 SPON1Q9HCB6 807 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 RIMS3Q9UJD0 308 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 FZD10Q9ULW2 581 aa12.83□□□□□ -0.35
VPS52-218ENST00000482399 A0A1W2PPW3 197 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 YJEFN3A6XGL0 299 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 SPTLC1O15269 473 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 CYP2C8P10632 490 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 MTHFD1P11586 935 aaKnown RBP12.83□□□□□ -0.36
VPS52-218ENST00000482399 PSMA4P25789 261 aaKnown RBP12.83□□□□□ -0.36
VPS52-218ENST00000482399 TKTP29401 623 aaKnown RBP12.83□□□□□ -0.36
VPS52-218ENST00000482399 ICAM3P32942 547 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 ADRA1BP35368 520 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 BNIP3Q12983 259 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 BFSP2Q13515 415 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 INPP5AQ14642 412 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 CNSTQ6PJW8 725 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 CUZD1Q86UP6 607 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 PCYOX1LQ8NBM8 494 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 SHCBP1Q8NEM2 672 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 FBXL20Q96IG2 436 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 HBEGFQ99075 208 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 IL22Q9GZX6 179 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 UTP6Q9NYH9 597 aaKnown RBP12.83□□□□□ -0.36
VPS52-218ENST00000482399 VTI1BQ9UEU0 232 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 DOCK5Q9H7D0 1870 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 DENRO43583 198 aaKnown RBP12.83□□□□□ -0.36
VPS52-218ENST00000482399 TSPAN1O60635 241 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 GMNNO75496 209 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 BCAS2O75934 225 aaPredicted RBP12.83□□□□□ -0.36
VPS52-218ENST00000482399 PAMP19021 973 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 PTPN9P43378 593 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 TAF6P49848 677 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 KPNA2P52292 529 aaKnown RBP12.83□□□□□ -0.36
VPS52-218ENST00000482399 PPP1R8Q12972 351 aaKnown RBP12.83□□□□□ -0.36
VPS52-218ENST00000482399 ITGADQ13349 1161 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 ANKDD1AQ495B1 522 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 RBM20Q5T481 1227 aaKnown RBP12.83□□□□□ -0.36
VPS52-218ENST00000482399 POTEHQ6S545 545 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 TXNDC5Q8NBS9 432 aaKnown RBP12.83□□□□□ -0.36
VPS52-218ENST00000482399 B3GALNT2Q8NCR0 500 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 DDHD1Q8NEL9 900 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 ITFG2Q969R8 447 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 OSBPL11Q9BXB4 747 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 DGCR6LQ9BY27 220 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 EML4Q9HC35 981 aaKnown RBP12.83□□□□□ -0.36
VPS52-218ENST00000482399 PFDN4Q9NQP4 134 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 PNPLA3Q9NST1 481 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 SELENONQ9NZV5 590 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 FBXO5Q9UKT4 447 aa12.83□□□□□ -0.36
VPS52-218ENST00000482399 SLCO1B7G3V0H7 640 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 NRP2O60462 931 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 MAN1A2O60476 641 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 PRKCGP05129 697 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 GLDCP23378 1020 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 NOS2P35228 1153 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 PERM1Q5SV97 790 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 NEPROQ6NW34 567 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 ARHGAP36Q6ZRI8 547 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 ZC3HC1Q86WB0 502 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms