RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 CCDC137Q6PK04 289 aaKnown RBP13.4□□□□□ -0.26
HDAC1-208ENST00000482310 ARHGEF18Q6ZSZ5 1173 aa13.4□□□□□ -0.26
HDAC1-208ENST00000482310 KDELC2Q7Z4H8 507 aa13.4□□□□□ -0.26
HDAC1-208ENST00000482310 BMP8AQ7Z5Y6 402 aa13.4□□□□□ -0.26
HDAC1-208ENST00000482310 FAM124AQ86V42 546 aa13.4□□□□□ -0.26
HDAC1-208ENST00000482310 TMPRSS6Q8IU80 811 aa13.4□□□□□ -0.26
HDAC1-208ENST00000482310 CCDC89Q8N998 374 aa13.4□□□□□ -0.26
HDAC1-208ENST00000482310 MDGA1Q8NFP4 955 aa13.4□□□□□ -0.26
HDAC1-208ENST00000482310 PIP4K2CQ8TBX8 421 aa13.4□□□□□ -0.26
HDAC1-208ENST00000482310 PSKH2Q96QS6 385 aa13.4□□□□□ -0.26
HDAC1-208ENST00000482310 RBM15Q96T37 977 aaKnown RBP eCLIP13.4□□□□□ -0.26
HDAC1-208ENST00000482310 MGME1Q9BQP7 344 aa13.4□□□□□ -0.26
HDAC1-208ENST00000482310 HEPHQ9BQS7 1158 aa13.4□□□□□ -0.26
HDAC1-208ENST00000482310 FRMD8P1Q9BZ68 369 aaPredicted RBP13.4□□□□□ -0.26
HDAC1-208ENST00000482310 USP29Q9HBJ7 922 aa13.4□□□□□ -0.26
HDAC1-208ENST00000482310 NOD2Q9HC29 1040 aa13.4□□□□□ -0.26
HDAC1-208ENST00000482310 CDC23Q9UJX2 597 aa13.4□□□□□ -0.26
HDAC1-208ENST00000482310 INVSQ9Y283 1065 aa13.4□□□□□ -0.26
HDAC1-208ENST00000482310 SPAG17Q6Q759 2223 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 C1QTNF3-AMACRE9PGA6 284 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 MTSS1O43312 755 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 ZNF500O60304 480 aaPredicted RBP13.39□□□□□ -0.27
HDAC1-208ENST00000482310 ALDH1A2O94788 518 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 APBB3O95704 486 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 TUBB4AP04350 444 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 ACADMP11310 421 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 PSMB4P28070 264 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 CD68P34810 354 aaPredicted RBP13.39□□□□□ -0.27
HDAC1-208ENST00000482310 COILP38432 576 aaPredicted RBP13.39□□□□□ -0.27
HDAC1-208ENST00000482310 HSPA9P38646 679 aaKnown RBP13.39□□□□□ -0.27
HDAC1-208ENST00000482310 VASPP50552 380 aaPredicted RBP13.39□□□□□ -0.27
HDAC1-208ENST00000482310 RPS14P62263 151 aaKnown RBP13.39□□□□□ -0.27
HDAC1-208ENST00000482310 MRPS25P82663 173 aaKnown RBP13.39□□□□□ -0.27
HDAC1-208ENST00000482310 CSTF1Q05048 431 aaKnown RBP13.39□□□□□ -0.27
HDAC1-208ENST00000482310 RAD51Q06609 339 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 ZNF33AQ06730 810 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 CFAP58Q5T655 872 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 DSG4Q86SJ6 1040 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 CAMK1DQ8IU85 385 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 C1orf210Q8IVY1 113 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 GLIS1Q8NBF1 620 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 SPATA22Q8NHS9 363 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 PRCCQ92733 491 aaPredicted RBP13.39□□□□□ -0.27
HDAC1-208ENST00000482310 NKD2Q969F2 451 aaPredicted RBP13.39□□□□□ -0.27
HDAC1-208ENST00000482310 SIPA1Q96FS4 1042 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 MRGPRX1Q96LB2 322 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 TEKT5Q96M29 485 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 NSMCE3Q96MG7 304 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 SPATA13Q96N96 652 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 KLHL32Q96NJ5 620 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 NUDCD1Q96RS6 583 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 FAM129BQ96TA1 746 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 RSPH9Q9H1X1 276 aaPredicted RBP13.39□□□□□ -0.27
HDAC1-208ENST00000482310 GLOD4Q9HC38 313 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 HAUS2Q9NVX0 235 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 ATP8A1Q9Y2Q0 1164 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 PCDHGC4Q9Y5F7 938 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 MRFAP1Q9Y605 127 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 WASF2Q9Y6W5 498 aa13.39□□□□□ -0.27
HDAC1-208ENST00000482310 TP53BP1Q12888 1972 aaPredicted RBP13.39□□□□□ -0.27
HDAC1-208ENST00000482310 CXorf51AA0A1B0GTR3 108 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 A0A1W2PP55 124 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 CFAP69A5D8W1 941 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 PMPCBO75439 489 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 POP4O95707 220 aaKnown RBP13.38□□□□□ -0.27
HDAC1-208ENST00000482310 MT-CYBP00156 380 aaPredicted RBP13.38□□□□□ -0.27
HDAC1-208ENST00000482310 DNTTP04053 509 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 PRNPP04156 253 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 PRKCGP05129 697 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 ITGAVP06756 1048 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 SLC8A1P32418 973 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 ACTN2P35609 894 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 CKAP4Q07065 602 aaKnown RBP13.38□□□□□ -0.27
HDAC1-208ENST00000482310 BCL2L1Q07817 233 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 CST6Q15828 149 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 NCEH1Q6PIU2 408 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 C12orf50Q8NA57 414 aaPredicted RBP13.38□□□□□ -0.27
HDAC1-208ENST00000482310 RLN3Q8WXF3 142 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 FATE1Q969F0 183 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 ARRDC3Q96B67 414 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 KRT12Q99456 494 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 IER2Q9BTL4 223 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 GBA3Q9H227 469 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 ATP13A3Q9H7F0 1226 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 CD248Q9HCU0 757 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 DYRK4Q9NR20 520 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 HOMER3Q9NSC5 361 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 CYP8B1Q9UNU6 501 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 TRPM6Q9BX84 2022 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 PLXNA2O75051 1894 aa13.38□□□□□ -0.27
HDAC1-208ENST00000482310 ABCA7Q8IZY2 2146 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 FANCMQ8IYD8 2048 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 PRR23AA6NEV1 266 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 K7ESF4 209 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 RNASEH2AO75792 299 aaKnown RBP13.37□□□□□ -0.27
HDAC1-208ENST00000482310 MMP2P08253 660 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 CR2P20023 1033 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 SERPINA4P29622 427 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 FNTBP49356 437 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 AP1S1P61966 158 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms