RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 DKK4Q9UBT3 224 aa23.82■■□□□ 1.4
TTC3-217ENST00000481605 PIAS2O75928 621 aa23.81■■□□□ 1.4
TTC3-217ENST00000481605 PSMA2P25787 234 aa23.81■■□□□ 1.4
TTC3-217ENST00000481605 ZNF165P49910 485 aa23.81■■□□□ 1.4
TTC3-217ENST00000481605 TPI1P60174 286 aa23.81■■□□□ 1.4
TTC3-217ENST00000481605 RHOAP61586 193 aa23.81■■□□□ 1.4
TTC3-217ENST00000481605 CYP4F3Q08477 520 aa23.81■■□□□ 1.4
TTC3-217ENST00000481605 ZNF211Q13398 564 aaPredicted RBP23.81■■□□□ 1.4
TTC3-217ENST00000481605 SERINC3Q13530 473 aa23.81■■□□□ 1.4
TTC3-217ENST00000481605 PLEKHA7Q6IQ23 1121 aa23.81■■□□□ 1.4
TTC3-217ENST00000481605 KYAT3Q6YP21 454 aaKnown RBP23.81■■□□□ 1.4
TTC3-217ENST00000481605 DNAAF5Q86Y56 855 aa23.81■■□□□ 1.4
TTC3-217ENST00000481605 DCP2Q8IU60 420 aaKnown RBP23.81■■□□□ 1.4
TTC3-217ENST00000481605 UMODL1-AS1Q8N2C9 162 aa23.81■■□□□ 1.4
TTC3-217ENST00000481605 ARHGEF26Q96DR7 871 aa23.81■■□□□ 1.4
TTC3-217ENST00000481605 C1QTNF2Q9BXJ5 285 aa23.81■■□□□ 1.4
TTC3-217ENST00000481605 HAUS4Q9H6D7 363 aa23.81■■□□□ 1.4
TTC3-217ENST00000481605 GPR27Q9NS67 375 aa23.81■■□□□ 1.4
TTC3-217ENST00000481605 GPATCH2LQ9NWQ4 482 aa23.81■■□□□ 1.4
TTC3-217ENST00000481605 GOLGA4Q13439 2230 aaKnown RBP23.81■■□□□ 1.4
TTC3-217ENST00000481605 FGF10O15520 208 aaPredicted RBP23.8■■□□□ 1.4
TTC3-217ENST00000481605 IGSF6O95976 241 aa23.8■■□□□ 1.4
TTC3-217ENST00000481605 RAD51Q06609 339 aa23.8■■□□□ 1.4
TTC3-217ENST00000481605 ILKQ13418 452 aa23.8■■□□□ 1.4
TTC3-217ENST00000481605 HS1BP3Q53T59 392 aa23.8■■□□□ 1.4
TTC3-217ENST00000481605 ZNF542PQ5EBM4 170 aa23.8■■□□□ 1.4
TTC3-217ENST00000481605 HES3Q5TGS1 186 aa23.8■■□□□ 1.4
TTC3-217ENST00000481605 TTC7BQ86TV6 843 aa23.8■■□□□ 1.4
TTC3-217ENST00000481605 OR4C6Q8NH72 309 aa23.8■■□□□ 1.4
TTC3-217ENST00000481605 IFT43Q96FT9 208 aa23.8■■□□□ 1.4
TTC3-217ENST00000481605 NAP1L5Q96NT1 182 aaPredicted RBP23.8■■□□□ 1.4
TTC3-217ENST00000481605 LENG8Q96PV6 779 aaPredicted RBP23.8■■□□□ 1.4
TTC3-217ENST00000481605 KLF6Q99612 283 aaPredicted RBP23.8■■□□□ 1.4
TTC3-217ENST00000481605 DNAJC28Q9NX36 388 aa23.8■■□□□ 1.4
TTC3-217ENST00000481605 AIPL1Q9NZN9 384 aa23.8■■□□□ 1.4
TTC3-217ENST00000481605 AP4E1Q9UPM8 1137 aa23.8■■□□□ 1.4
TTC3-217ENST00000481605 RAXQ9Y2V3 346 aa23.8■■□□□ 1.4
TTC3-217ENST00000481605 ARID1BQ8NFD5 2236 aaPredicted RBP23.8■■□□□ 1.4
TTC3-217ENST00000481605 A0A1W2PQC6 194 aa23.79■■□□□ 1.4
TTC3-217ENST00000481605 FPGTO14772 594 aa23.79■■□□□ 1.4
TTC3-217ENST00000481605 FFAR2O15552 330 aa23.79■■□□□ 1.4
TTC3-217ENST00000481605 SPINT1O43278 529 aa23.79■■□□□ 1.4
TTC3-217ENST00000481605 ACP1P24666 158 aa23.79■■□□□ 1.4
TTC3-217ENST00000481605 HTR7P34969 479 aa23.79■■□□□ 1.4
TTC3-217ENST00000481605 RABIFP47224 123 aa23.79■■□□□ 1.4
TTC3-217ENST00000481605 LRRC73Q5JTD7 316 aa23.79■■□□□ 1.4
TTC3-217ENST00000481605 E4F1Q66K89 784 aaPredicted RBP23.79■■□□□ 1.4
TTC3-217ENST00000481605 ZNF571Q7Z3V5 609 aaPredicted RBP23.79■■□□□ 1.4
TTC3-217ENST00000481605 PKD1L2Q7Z442 2459 aa23.79■■□□□ 1.4
TTC3-217ENST00000481605 A0A1B0GTH6 734 aa23.79■■□□□ 1.4
TTC3-217ENST00000481605 AREL1O15033 823 aa23.79■■□□□ 1.4
TTC3-217ENST00000481605 DHX35Q9H5Z1 703 aaKnown RBP23.79■■□□□ 1.4
TTC3-217ENST00000481605 DONSONQ9NYP3 566 aa23.79■■□□□ 1.4
TTC3-217ENST00000481605 LHX6Q9UPM6 363 aa23.79■■□□□ 1.4
TTC3-217ENST00000481605 MFHAS1Q9Y4C4 1052 aa23.79■■□□□ 1.4
TTC3-217ENST00000481605 GPSM3Q9Y4H4 160 aa23.79■■□□□ 1.4
TTC3-217ENST00000481605 DSPP15924 2871 aaKnown RBP23.78■■□□□ 1.4
TTC3-217ENST00000481605 SPTY2D1-AS1A0A0U1RR47 76 aa23.78■■□□□ 1.4
TTC3-217ENST00000481605 FTLP02792 175 aaPredicted RBP23.78■■□□□ 1.4
TTC3-217ENST00000481605 HNRNPKP61978 463 aaKnown RBP eCLIP23.78■■□□□ 1.4
TTC3-217ENST00000481605 TARDBPQ13148 414 aaKnown RBP eCLIP23.78■■□□□ 1.42e-7■■■■■ 39.4
TTC3-217ENST00000481605 FZD2Q14332 565 aa23.78■■□□□ 1.4
TTC3-217ENST00000481605 CYTH1Q15438 398 aa23.78■■□□□ 1.4
TTC3-217ENST00000481605 CA9Q16790 459 aa23.78■■□□□ 1.4
TTC3-217ENST00000481605 ARFGAP1Q8N6T3 406 aa23.78■■□□□ 1.4
TTC3-217ENST00000481605 ASB12Q8WXK4 309 aa23.78■■□□□ 1.4
TTC3-217ENST00000481605 EXOC2Q96KP1 924 aa23.78■■□□□ 1.4
TTC3-217ENST00000481605 LRRC19Q9H756 370 aa23.78■■□□□ 1.4
TTC3-217ENST00000481605 LHX3Q9UBR4 397 aa23.78■■□□□ 1.4
TTC3-217ENST00000481605 UBA2Q9UBT2 640 aaPredicted RBP23.78■■□□□ 1.4
TTC3-217ENST00000481605 PCSK1NQ9UHG2 260 aa23.78■■□□□ 1.4
TTC3-217ENST00000481605 IPO11Q9UI26 975 aaKnown RBP23.78■■□□□ 1.4
TTC3-217ENST00000481605 TMEM191CA6NGB0 347 aa23.77■■□□□ 1.4
TTC3-217ENST00000481605 EEF2KO00418 725 aaKnown RBP23.77■■□□□ 1.4
TTC3-217ENST00000481605 INSIG1O15503 277 aa23.77■■□□□ 1.4
TTC3-217ENST00000481605 GIMD1P0DJR0 217 aa23.77■■□□□ 1.4
TTC3-217ENST00000481605 GZMAP12544 262 aa23.77■■□□□ 1.4
TTC3-217ENST00000481605 PRKCIP41743 596 aa23.77■■□□□ 1.4
TTC3-217ENST00000481605 NDST2P52849 883 aa23.77■■□□□ 1.4
TTC3-217ENST00000481605 DAB2P98082 770 aa23.77■■□□□ 1.4
TTC3-217ENST00000481605 KLHL30Q0D2K2 578 aa23.77■■□□□ 1.4
TTC3-217ENST00000481605 PDE1CQ14123 709 aaPredicted RBP23.77■■□□□ 1.4
TTC3-217ENST00000481605 ERMARDQ5T6L9 678 aa23.77■■□□□ 1.4
TTC3-217ENST00000481605 PARGQ86W56 976 aa23.77■■□□□ 1.4
TTC3-217ENST00000481605 DENND6BQ8NEG7 585 aa23.77■■□□□ 1.4
TTC3-217ENST00000481605 CELF6Q96J87 481 aaKnown RBP23.77■■□□□ 1.4
TTC3-217ENST00000481605 PEBP4Q96S96 227 aa23.77■■□□□ 1.4
TTC3-217ENST00000481605 SNRNP25Q9BV90 132 aaKnown RBP23.77■■□□□ 1.4
TTC3-217ENST00000481605 TRIM7Q9C029 511 aa23.77■■□□□ 1.4
TTC3-217ENST00000481605 DKK3Q9UBP4 350 aa23.77■■□□□ 1.4
TTC3-217ENST00000481605 NEMP2A6NFY4 417 aa23.76■■□□□ 1.39
TTC3-217ENST00000481605 J3KR12 359 aa23.76■■□□□ 1.39
TTC3-217ENST00000481605 DDX3XO00571 662 aaKnown RBP eCLIP23.76■■□□□ 1.398e-8■■■■■ 36.6
TTC3-217ENST00000481605 RNF8O76064 485 aa23.76■■□□□ 1.39
TTC3-217ENST00000481605 SERPINC1P01008 464 aa23.76■■□□□ 1.39
TTC3-217ENST00000481605 CSF2P04141 144 aa23.76■■□□□ 1.39
TTC3-217ENST00000481605 ALPPL2P10696 532 aa23.76■■□□□ 1.39
TTC3-217ENST00000481605 IQCB1Q15051 598 aa23.76■■□□□ 1.39
TTC3-217ENST00000481605 C19orf48Q6RUI8 117 aa23.76■■□□□ 1.39
TTC3-217ENST00000481605 KDM7AQ6ZMT4 941 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms