RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 REXO1L1PQ8IX06 675 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 ABCA7Q8IZY2 2146 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 SNX19Q92543 992 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 MAML1Q92585 1016 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 RUBCNQ92622 972 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 HDAC11Q96DB2 347 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 OLFM3Q96PB7 478 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 FAM118BQ9BPY3 351 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 CEP41Q9BYV8 373 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 TMEM74BQ9NUR3 256 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 RBM22Q9NW64 420 aaKnown RBP eCLIP20.61■□□□□ 0.89
CTSA-206ENST00000480961 SEPT10Q9P0V9 454 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 PYCARDQ9ULZ3 195 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 TTLL3Q9Y4R7 772 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 EML5Q05BV3 1969 aa20.61■□□□□ 0.89
CTSA-206ENST00000480961 TBC1D3DA0A087WVF3 549 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 TBC1D3IA0A087WXS9 549 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 TBC1D3EA0A087X179 549 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 TBC1D3KA0A087X1G2 549 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 BCLAF3A2AJT9 711 aaKnown RBP20.6■□□□□ 0.89
CTSA-206ENST00000480961 TBC1D3FA6NER0 549 aaPredicted RBP20.6■□□□□ 0.89
CTSA-206ENST00000480961 METTL12A8MUP2 240 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 MEI4A8MW99 385 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 TBC1D3LB9A6J9 549 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 TBC1D3HP0C7X1 549 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 CCNB1P14635 433 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 ITIH2P19823 946 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 TGM2P21980 687 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 ITGB7P26010 798 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 RENBPP51606 427 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 PPIDQ08752 370 aaKnown RBP20.6■□□□□ 0.89
CTSA-206ENST00000480961 NSUN2Q08J23 767 aaKnown RBP eCLIP20.6■□□□□ 0.89
CTSA-206ENST00000480961 SPEM2Q0P670 501 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 CCDC173Q0VFZ6 552 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 HNRNPDQ14103 355 aaKnown RBP20.6■□□□□ 0.89
CTSA-206ENST00000480961 ZNF805Q5CZA5 627 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 MEI1Q5TIA1 1274 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 TBC1D3GQ6DHY5 549 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 TBC1D3CQ6IPX1 549 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 TIGD7Q6NT04 549 aaPredicted RBP20.6■□□□□ 0.89
CTSA-206ENST00000480961 ZC3H18Q86VM9 953 aaKnown RBP20.6■□□□□ 0.89
CTSA-206ENST00000480961 RGL4Q8IZJ4 473 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 TBC1D3Q8IZP1 549 aaPredicted RBP20.6■□□□□ 0.89
CTSA-206ENST00000480961 TEX26Q8N6G2 289 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 CADM4Q8NFZ8 388 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 P3H4Q92791 437 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 PPP1R16AQ96I34 528 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 LRIG1Q96JA1 1093 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 LOXL4Q96JB6 756 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 ALS2CR12Q96Q35 445 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 HDAC8Q9BY41 377 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 MIR1-1HGQ9H1L0 117 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 C10orf88Q9H8K7 445 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 NOD2Q9HC29 1040 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 FANCMQ8IYD8 2048 aa20.6■□□□□ 0.89
CTSA-206ENST00000480961 EP300Q09472 2414 aaPredicted RBP20.59■□□□□ 0.89
CTSA-206ENST00000480961 LRRC72A6NJI9 287 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 CETN2P41208 172 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 CSNK1DP48730 415 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 NR2C2P49116 596 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 ZBTB17Q13105 803 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 RPS6KA1Q15418 735 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 SPDYCQ5MJ68 293 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 FBXL19Q6PCT2 694 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 BBS5Q8N3I7 341 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 OR2T34Q8NGX1 318 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 FOXJ1Q92949 421 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 FAM131CQ96AQ9 280 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 BIRC7Q96CA5 298 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 MGME1Q9BQP7 344 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 OSBPL1AQ9BXW6 950 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 CPEB1Q9BZB8 566 aaKnown RBP20.59■□□□□ 0.89
CTSA-206ENST00000480961 SUV39H2Q9H5I1 410 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 PARD6AQ9NPB6 346 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 SCUBE2Q9NQ36 999 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 SLCO1B1Q9Y6L6 691 aa20.59■□□□□ 0.89
CTSA-206ENST00000480961 PPP1R12AO14974 1030 aaPredicted RBP20.58■□□□□ 0.89
CTSA-206ENST00000480961 ZSCAN12O43309 604 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 PLRG1O43660 514 aaKnown RBP20.58■□□□□ 0.89
CTSA-206ENST00000480961 NEBLO76041 1014 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 PRKCGP05129 697 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 ADRB3P13945 408 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 TIMP2P16035 220 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 MAT2AP31153 395 aaKnown RBP20.58■□□□□ 0.89
CTSA-206ENST00000480961 PTPN7P35236 360 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 MPLP40238 635 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 ABL2P42684 1182 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 NEK3P51956 506 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 PPP2CBP62714 309 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 PPP2CAP67775 309 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 KIAA0895LQ68EN5 471 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 NUDCD1Q96RS6 583 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 ATP13A3Q9H7F0 1226 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 EIF2B4Q9UI10 523 aaKnown RBP20.58■□□□□ 0.89
CTSA-206ENST00000480961 ITM2BQ9Y287 266 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.58■□□□□ 0.89
CTSA-206ENST00000480961 PCDHGC4Q9Y5F7 938 aa20.58■□□□□ 0.89
CTSA-206ENST00000480961 RIF1Q5UIP0 2472 aaKnown RBP20.58■□□□□ 0.88
CTSA-206ENST00000480961 TCRBV7S2A1N4TA0A589 114 aa20.57■□□□□ 0.88
CTSA-206ENST00000480961 USP27XA6NNY8 438 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms