RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 C2orf49Q9BVC5 232 aaPredicted RBP9.23□□□□□ -0.93
VCP-206ENST00000480327 HEMGNQ9BXL5 484 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 MAGEH1Q9H213 219 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 LRRC19Q9H756 370 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 RCOR3Q9P2K3 495 aaPredicted RBP9.23□□□□□ -0.93
VCP-206ENST00000480327 SLC25A13Q9UJS0 675 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 BTBD3Q9Y2F9 522 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 COL5A1P20908 1838 aaPredicted RBP9.23□□□□□ -0.93
VCP-206ENST00000480327 URB1O60287 2271 aaKnown RBP9.22□□□□□ -0.93
VCP-206ENST00000480327 SETXQ7Z333 2677 aaKnown RBP9.22□□□□□ -0.93
VCP-206ENST00000480327 ARID1BQ8NFD5 2236 aaPredicted RBP9.22□□□□□ -0.93
VCP-206ENST00000480327 hCG_1818297A0A087WSY0 165 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 ARHGAP42A6NI28 874 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 MIF4GDA9UHW6 222 aaKnown RBP9.22□□□□□ -0.93
VCP-206ENST00000480327 J3KR12 359 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 ENC1O14682 589 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 APOL1O14791 398 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 SMAD6O43541 496 aaKnown RBP9.22□□□□□ -0.93
VCP-206ENST00000480327 KDELR3O43731 214 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 ZMPSTE24O75844 475 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 EPHX1P07099 455 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 ATXN1LP0C7T5 689 aaKnown RBP9.22□□□□□ -0.93
VCP-206ENST00000480327 VAV1P15498 845 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 CDKN2BP42772 138 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 NDST2P52849 883 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 YBEYP58557 167 aaPredicted RBP9.22□□□□□ -0.93
VCP-206ENST00000480327 ARF5P84085 180 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 GBE1Q04446 702 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 SULT2A1Q06520 285 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 ADCY2Q08462 1091 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 SERINC3Q13530 473 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 HNRNPDQ14103 355 aaKnown RBP9.22□□□□□ -0.93
VCP-206ENST00000480327 RPS6KA1Q15418 735 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 HLA-BQ31612 363 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 PARP15Q460N3 678 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 SOWAHCQ53LP3 525 aaPredicted RBP9.22□□□□□ -0.93
VCP-206ENST00000480327 TFDP3Q5H9I0 405 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 WDR45BQ5MNZ6 344 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 SYCP2LQ5T4T6 812 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 MEI1Q5TIA1 1274 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 ZNF783Q6ZMS7 281 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 B4GALNT4Q76KP1 1039 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 TMPRSS6Q8IU80 811 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 SLC35F6Q8N357 371 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 DCAF4L2Q8NA75 395 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 ATP11CQ8NB49 1132 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 CADM4Q8NFZ8 388 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 TRIM58Q8NG06 486 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 MDM1Q8TC05 714 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 HES6Q96HZ4 224 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 BBC3Q96PG8 261 aaPredicted RBP9.22□□□□□ -0.93
VCP-206ENST00000480327 ORAI3Q9BRQ5 295 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 HERPUD2Q9BSE4 406 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 ACE2Q9BYF1 805 aaPredicted RBP9.22□□□□□ -0.93
VCP-206ENST00000480327 MIR1-1HGQ9H1L0 117 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 C6orf106Q9H6K1 298 aaPredicted RBP9.22□□□□□ -0.93
VCP-206ENST00000480327 RETREG1Q9H6L5 497 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 GAREM1Q9H706 876 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 DONSONQ9NYP3 566 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 SAE1Q9UBE0 346 aaPredicted RBP9.22□□□□□ -0.93
VCP-206ENST00000480327 SUSD2Q9UGT4 822 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 EIF2B4Q9UI10 523 aaKnown RBP9.22□□□□□ -0.93
VCP-206ENST00000480327 HPCAL4Q9UM19 191 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 FCF1Q9Y324 198 aaKnown RBP9.22□□□□□ -0.93
VCP-206ENST00000480327 HEY1Q9Y5J3 304 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 CHD5Q8TDI0 1954 aa9.22□□□□□ -0.93
VCP-206ENST00000480327 A0A1B0GVT2 93 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 MEI4A8MW99 385 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 BCAT2O15382 392 aaPredicted RBP9.21□□□□□ -0.94
VCP-206ENST00000480327 KIF5CO60282 957 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 SYNCRIPO60506 623 aaKnown RBP9.21□□□□□ -0.94
VCP-206ENST00000480327 CST8O60676 142 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 SRPRAP08240 638 aaKnown RBP9.21□□□□□ -0.94
VCP-206ENST00000480327 ZNF883P0CG24 379 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 SRCP12931 536 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 GNSP15586 552 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 ACSL1P33121 698 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 SERPINB6P35237 376 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 ETFBP38117 255 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 NNMTP40261 264 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 SLC10A2Q12908 348 aaPredicted RBP9.21□□□□□ -0.94
VCP-206ENST00000480327 CAMK2BQ13554 666 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 CAMK2GQ13555 558 aaPredicted RBP9.21□□□□□ -0.94
VCP-206ENST00000480327 PAFAH1B3Q15102 231 aaKnown RBP9.21□□□□□ -0.94
VCP-206ENST00000480327 DLG2Q15700 870 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 COL28A1Q2UY09 1125 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 FAM182AQ5T1J6 154 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 CCDC181Q5TID7 509 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 AFMIDQ63HM1 303 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 SLC9A4Q6AI14 798 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 RETSATQ6NUM9 610 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 LAYNQ6UX15 382 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 FAM124AQ86V42 546 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 LZTR1Q8N653 840 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 PLD5Q8N7P1 536 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 TRIM44Q96DX7 344 aaPredicted RBP9.21□□□□□ -0.94
VCP-206ENST00000480327 SIPA1Q96FS4 1042 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 MYO19Q96H55 970 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 TLR10Q9BXR5 811 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 ZDHHC5Q9C0B5 715 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms