RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 RHOT1Q8IXI2 618 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 RYBPQ8N488 228 aaPredicted RBP8.06□□□□□ -1.12
DDX39B-218ENST00000478365 OXR1Q8N573 874 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 ATPAF2Q8N5M1 289 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 AADATQ8N5Z0 425 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 CCDC112Q8NEF3 446 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 RNF217Q8TC41 542 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 SNX19Q92543 992 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 TSC1Q92574 1164 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 ERLEC1Q96DZ1 483 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 ZNF641Q96N77 438 aaPredicted RBP8.06□□□□□ -1.12
DDX39B-218ENST00000478365 CINPQ9BW66 212 aaPredicted RBP8.06□□□□□ -1.12
DDX39B-218ENST00000478365 C1QTNF7Q9BXJ2 289 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 PACSIN1Q9BY11 444 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 BRD8Q9H0E9 1235 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 MIR1-1HGQ9H1L0 117 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 CXorf56Q9H5V9 222 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 NOL6Q9H6R4 1146 aaKnown RBP8.06□□□□□ -1.12
DDX39B-218ENST00000478365 ZDHHC6Q9H6R6 413 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 NDFIP2Q9NV92 336 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 GPATCH2LQ9NWQ4 482 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 HECAQ9UBI9 543 aaPredicted RBP8.06□□□□□ -1.12
DDX39B-218ENST00000478365 AMACRQ9UHK6 382 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 IPO11Q9UI26 975 aaKnown RBP8.06□□□□□ -1.12
DDX39B-218ENST00000478365 FCF1Q9Y324 198 aaKnown RBP8.06□□□□□ -1.12
DDX39B-218ENST00000478365 EPN1Q9Y6I3 576 aaPredicted RBP8.06□□□□□ -1.12
DDX39B-218ENST00000478365 PCNX2A6NKB5 2137 aa8.06□□□□□ -1.12
DDX39B-218ENST00000478365 TBC1D3DA0A087WVF3 549 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 TBC1D3IA0A087WXS9 549 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 TBC1D3EA0A087X179 549 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 TBC1D3KA0A087X1G2 549 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 LNP1A1A4G5 178 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 TBC1D3FA6NER0 549 aaPredicted RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 TBC1D3LB9A6J9 549 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 PRAMEF26H0Y7S4 382 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 K7ERQ8 282 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 DFFAO00273 331 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 KRIT1O00522 736 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 ARHGAP33O14559 1287 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 TOR1BO14657 336 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 TSPAN6O43657 245 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 SPOPO43791 374 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 OPHN1O60890 802 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 LEFTY1O75610 366 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 PALMO75781 387 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 NEBLO76041 1014 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 FSBPO95073 299 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 TBC1D3HP0C7X1 549 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 VAV1P15498 845 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 ENGP17813 658 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 CA4P22748 312 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 XPAP23025 273 aaPredicted RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 GLDCP23378 1020 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 SERPINA4P29622 427 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 CETN2P41208 172 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 C21orf59P57076 290 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 POLR2LP62875 67 aaKnown RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 RPS21P63220 83 aaKnown RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 ELP6Q0PNE2 266 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 CNTN1Q12860 1018 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 ZNF235Q14590 738 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 PAFAH1B3Q15102 231 aaKnown RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 SF3A2Q15428 464 aaKnown RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 RSPO4Q2I0M5 234 aaPredicted RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 ARSIQ5FYB1 569 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 KCNT1Q5JUK3 1230 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 TBC1D3GQ6DHY5 549 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 TBC1D3CQ6IPX1 549 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 NAPEPLDQ6IQ20 393 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 ADAT2Q7Z6V5 191 aaKnown RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 HORMAD1Q86X24 394 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 TBC1D3Q8IZP1 549 aaPredicted RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 FRMD1Q8N878 549 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 GRIN3AQ8TCU5 1115 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 ASB12Q8WXK4 309 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 BIRC7Q96CA5 298 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 FAF2Q96CS3 445 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 FEM1CQ96JP0 617 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 PSKH2Q96QS6 385 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 BAG1Q99933 345 aaPredicted RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 CALN1Q9BXU9 219 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 MAK16Q9BXY0 300 aaKnown RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 TM6SF2Q9BZW4 377 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 KLC2Q9H0B6 622 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 TNKS2Q9H2K2 1166 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 MTG2Q9H4K7 406 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 C6orf106Q9H6K1 298 aaPredicted RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 ATP13A3Q9H7F0 1226 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 PDFQ9HBH1 243 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 EIF2B4Q9UI10 523 aaKnown RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 PCDHA13Q9Y5I0 950 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.05□□□□□ -1.12
DDX39B-218ENST00000478365 WASF2Q9Y6W5 498 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 DMDP11532 3685 aa8.05□□□□□ -1.12
DDX39B-218ENST00000478365 LAMA1P25391 3075 aa8.04□□□□□ -1.12
DDX39B-218ENST00000478365 NCOR2Q9Y618 2525 aa8.04□□□□□ -1.12
DDX39B-218ENST00000478365 LRRD1A4D1F6 860 aa8.04□□□□□ -1.12
DDX39B-218ENST00000478365 KLHL33A6NCF5 533 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms