RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 B4GALNT4Q76KP1 1039 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 PARS2Q7L3T8 475 aaKnown RBP10.41□□□□□ -0.74
HDAC6-222ENST00000478095 VSIG1Q86XK7 387 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 RCOR2Q8IZ40 523 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 RGL4Q8IZJ4 473 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 SYCE1Q8N0S2 351 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 PGBD5Q8N414 524 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 CCNYQ8ND76 341 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 EXD1Q8NHP7 514 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 NSMCE1Q8WV22 266 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 WNT2BQ93097 391 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 TCEAL3Q969E4 200 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 ZNF419Q96HQ0 510 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-222ENST00000478095 PPP1R16AQ96I34 528 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 LOXL4Q96JB6 756 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 PDLIM2Q96JY6 352 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 KLHL32Q96NJ5 620 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 LGMNQ99538 433 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 HEMGNQ9BXL5 484 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 MIR1-1HGQ9H1L0 117 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 KCNF1Q9H3M0 494 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 SGK2Q9HBY8 427 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 TMEM74BQ9NUR3 256 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 SEPT3Q9UH03 358 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 AMFRQ9UKV5 643 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 PPP2R2CQ9Y2T4 447 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 TTLL3Q9Y4R7 772 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 PCDHA3Q9Y5H8 950 aa10.41□□□□□ -0.74
HDAC6-222ENST00000478095 ZFHX2Q9C0A1 2572 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-222ENST00000478095 CKAP5Q14008 2032 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 METTL12A8MUP2 240 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 PATE3B3GLJ2 98 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 DDX3YO15523 660 aaKnown RBP10.4□□□□□ -0.74
HDAC6-222ENST00000478095 PLRG1O43660 514 aaKnown RBP10.4□□□□□ -0.74
HDAC6-222ENST00000478095 ZFXP17010 805 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-222ENST00000478095 MX2P20592 715 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 ITGB7P26010 798 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 MMP13P45452 471 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 PEX5P50542 639 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 SCNN1BP51168 640 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 NEK3P51956 506 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 RWDD2BP57060 319 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 TAS2R38P59533 333 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 PPP2CBP62714 309 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 PPP2CAP67775 309 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 ZNF211Q13398 564 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-222ENST00000478095 TFDP2Q14188 446 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 SF3A2Q15428 464 aaKnown RBP10.4□□□□□ -0.74
HDAC6-222ENST00000478095 TAZQ16635 292 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 SPDYCQ5MJ68 293 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 PIP5KL1Q5T9C9 394 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 MARC1Q5VT66 337 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 KIAA0895LQ68EN5 471 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 TIGD7Q6NT04 549 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-222ENST00000478095 GDPD4Q6W3E5 623 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 ERN2Q76MJ5 926 aaKnown RBP10.4□□□□□ -0.74
HDAC6-222ENST00000478095 LAPTM4BQ86VI4 370 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 KIAA2013Q8IYS2 634 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.4□□□□□ -0.74
HDAC6-222ENST00000478095 RNF10Q8N5U6 811 aaKnown RBP10.4□□□□□ -0.74
HDAC6-222ENST00000478095 CADM4Q8NFZ8 388 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 OR2T34Q8NGX1 318 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 FOXJ1Q92949 421 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 FAM131CQ96AQ9 280 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 BIRC7Q96CA5 298 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 ZNF599Q96NL3 588 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 PSKH2Q96QS6 385 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 HERPUD2Q9BSE4 406 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 CEP41Q9BYV8 373 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 NT5MQ9NPB1 228 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 FSCN3Q9NQT6 498 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 SEMA4GQ9NTN9 838 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 EIF2B4Q9UI10 523 aaKnown RBP10.4□□□□□ -0.74
HDAC6-222ENST00000478095 ITM2BQ9Y287 266 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-222ENST00000478095 PCDHGA5Q9Y5G8 931 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 SLCO1B1Q9Y6L6 691 aa10.4□□□□□ -0.74
HDAC6-222ENST00000478095 TBC1D3DA0A087WVF3 549 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 TBC1D3IA0A087WXS9 549 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 TBC1D3EA0A087X179 549 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 TBC1D3KA0A087X1G2 549 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 TBC1D3FA6NER0 549 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-222ENST00000478095 LRRC72A6NJI9 287 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 C16orf96A6NNT2 1141 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 TBC1D3LB9A6J9 549 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 KCNK1O00180 336 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 MATN3O15232 486 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 SLC7A4O43246 635 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 CFIP05156 583 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 IGHV4-34P06331 123 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 TBC1D3HP0C7X1 549 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 PYGMP11217 842 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 ADRB3P13945 408 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 TGM1P22735 817 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 CCNCP24863 283 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 MAT2AP31153 395 aaKnown RBP10.39□□□□□ -0.75
HDAC6-222ENST00000478095 ABL2P42684 1182 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 RAD51Q06609 339 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 ITKQ08881 620 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 AP1B1Q10567 949 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms