RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 RCBTB1Q8NDN9 531 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 PRR7Q8TB68 274 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 GRIN3AQ8TCU5 1115 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 CLEC4CQ8WTT0 213 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 SLC35F5Q8WV83 523 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 MARVELD3Q96A59 401 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 PPP1R16AQ96I34 528 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 FAXDC2Q96IV6 333 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 BTN2A3PQ96KV6 586 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 CCDC114Q96M63 670 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 SERPINB11Q96P15 392 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 EFHD1Q9BUP0 239 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 ASPSCR1Q9BZE9 553 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 LRRC27Q9C0I9 530 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 GDPD2Q9HCC8 539 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 NPDC1Q9NQX5 325 aaPredicted RBP7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 LRIT1Q9P2V4 623 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 IL36AQ9UHA7 158 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 GGT7Q9UJ14 662 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 VPS28Q9UK41 221 aa7.45□□□□□ -1.22
SPTLC1-205ENST00000477888 PCNX1Q96RV3 2341 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 A0A1B0GTL3 188 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 TCAF2A6NFQ2 919 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 KCNU1A8MYU2 1149 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 F5H5T6 163 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 TSPAN6O43657 245 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 SNAP91O60641 907 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 SORBS2O94875 1100 aaKnown RBP7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 CTSEP14091 401 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 TCN2P20062 427 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 RRM1P23921 792 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 GCLMP48507 274 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 PEX5P50542 639 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 PPP3CAQ08209 521 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 ARHGEF7Q14155 803 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 HLTFQ14527 1009 aaKnown RBP eCLIP7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 TCEA2Q15560 299 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 CLPPQ16740 277 aaPredicted RBP7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 TTC39BQ5VTQ0 682 aaPredicted RBP7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 SYPL2Q5VXT5 272 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 FBXL22Q6P050 247 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 NYAP1Q6ZVC0 841 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 BRAPQ7Z569 592 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 HID1Q8IV36 788 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 NLGN4XQ8N0W4 816 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 PDILTQ8N807 584 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 ATP11CQ8NB49 1132 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 NLGN4YQ8NFZ3 816 aaPredicted RBP7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 GOLGA5Q8TBA6 731 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 PDCD6IPQ8WUM4 868 aaKnown RBP7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 STARD8Q92502 1023 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 SEMA4DQ92854 862 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 ART4Q93070 314 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 TSACCQ96A04 125 aaPredicted RBP7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 KIAA1143Q96AT1 154 aaPredicted RBP7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 RBM15Q96T37 977 aaKnown RBP eCLIP7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 PSMB7Q99436 277 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 NUDT22Q9BRQ3 303 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 CYP4F12Q9HCS2 524 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 SLC39A2Q9NP94 309 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 MBNL1Q9NR56 388 aaKnown RBP7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 SLC39A1Q9NY26 324 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 HESX1Q9UBX0 185 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 TLK1Q9UKI8 766 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 TBC1D30Q9Y2I9 924 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 SCN8AQ9UQD0 1980 aa7.44□□□□□ -1.22
SPTLC1-205ENST00000477888 ESPL1Q14674 2120 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 SDK2Q58EX2 2172 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 B4E171 279 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 O00370 1275 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 PIK3R2O00459 728 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 EIF5BO60841 1220 aaKnown RBP7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 RASGRP1O95267 797 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 APOEP02649 317 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 SETSIPP0DME0 302 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 CD1CP29017 333 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 TSPAN7P41732 249 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 ABL2P42684 1182 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 RGS7P49802 495 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 IRAK1P51617 712 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 CLCN6P51797 869 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 VAMP7P51809 220 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 LIMK2P53671 638 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 OR1D5P58170 312 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 CENPCQ03188 943 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 ABHD18Q0P651 414 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 TRA2AQ13595 282 aaKnown RBP eCLIP7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 INPP5JQ15735 1006 aaPredicted RBP7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 EDRF1Q3B7T1 1238 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 AMZ1Q400G9 498 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 MAP9Q49MG5 647 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 NADK2Q4G0N4 442 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 C14orf28Q4W4Y0 310 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 DCAF12Q5T6F0 453 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 KCTD16Q68DU8 428 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 C16orf46Q6P387 395 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 UNC13DQ70J99 1090 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 PARS2Q7L3T8 475 aaKnown RBP7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 BEND5Q7L4P6 421 aa7.43□□□□□ -1.22
SPTLC1-205ENST00000477888 RD3Q7Z3Z2 195 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms