RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 OR2AP1Q8NGE2 309 aa17.92■□□□□ 0.46
PTPN7-209ENST00000477554 TSC1Q92574 1164 aa17.92■□□□□ 0.46
PTPN7-209ENST00000477554 CSPG4P5Q96PW8 444 aa17.92■□□□□ 0.46
PTPN7-209ENST00000477554 RETREG1Q9H6L5 497 aa17.92■□□□□ 0.46
PTPN7-209ENST00000477554 DNAAF2Q9NVR5 837 aaKnown RBP17.92■□□□□ 0.46
PTPN7-209ENST00000477554 IP6K2Q9UHH9 426 aa17.92■□□□□ 0.46
PTPN7-209ENST00000477554 FRYQ5TBA9 3013 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 H0Y8X5 98 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 DFFAO00273 331 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 SH3BP5O60239 455 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 PRAMEF11O60813 436 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 PIGNO95427 931 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 PRNPP04156 253 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 CCR5P51681 352 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 AFF3P51826 1226 aaKnown RBP17.91■□□□□ 0.46
PTPN7-209ENST00000477554 ATXN3P54252 364 aaPredicted RBP17.91■□□□□ 0.46
PTPN7-209ENST00000477554 YBEYP58557 167 aaPredicted RBP17.91■□□□□ 0.46
PTPN7-209ENST00000477554 PIGHQ14442 188 aaPredicted RBP17.91■□□□□ 0.46
PTPN7-209ENST00000477554 TCEAL1Q15170 157 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 MYLK3Q32MK0 819 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 PARP15Q460N3 678 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 RNF10Q8N5U6 811 aaKnown RBP17.91■□□□□ 0.46
PTPN7-209ENST00000477554 SLC35G2Q8TBE7 412 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 ISG20Q96AZ6 181 aaKnown RBP17.91■□□□□ 0.46
PTPN7-209ENST00000477554 SERAC1Q96JX3 654 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 LZTFL1Q9NQ48 299 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 HPCAL4Q9UM19 191 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 SHROOM3Q8TF72 1996 aa17.91■□□□□ 0.46
PTPN7-209ENST00000477554 SPAARA0A1B0GVQ0 90 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 A0A1W2PQU0 124 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 DAPK3O43293 454 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 BUB1BO60566 1050 aaPredicted RBP17.9■□□□□ 0.46
PTPN7-209ENST00000477554 OPHN1O60890 802 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 MAP3K6O95382 1288 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 GSRP00390 522 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 SYPP08247 313 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 ADRB3P13945 408 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 SSR1P43307 286 aaKnown RBP17.9■□□□□ 0.46
PTPN7-209ENST00000477554 RECQLP46063 649 aaPredicted RBP17.9■□□□□ 0.46
PTPN7-209ENST00000477554 NOP2P46087 812 aaKnown RBP17.9■□□□□ 0.46
PTPN7-209ENST00000477554 NAP1L1P55209 391 aaKnown RBP17.9■□□□□ 0.46
PTPN7-209ENST00000477554 SEMG2Q02383 582 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 ZNF284Q2VY69 593 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 RABEPKQ7Z6M1 372 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 ZSWIM9Q86XI8 627 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 TSEN2Q8NCE0 465 aaKnown RBP17.9■□□□□ 0.46
PTPN7-209ENST00000477554 KLHL32Q96NJ5 620 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 HDAC8Q9BY41 377 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 AASDHPPTQ9NRN7 309 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 LCMT1Q9UIC8 334 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 GUCA1BQ9UMX6 200 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 BTBD3Q9Y2F9 522 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 FARP1Q9Y4F1 1045 aaPredicted RBP17.9■□□□□ 0.46
PTPN7-209ENST00000477554 HYOU1Q9Y4L1 999 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 ANKRD36A6QL64 1941 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 PCNX2A6NKB5 2137 aa17.9■□□□□ 0.46
PTPN7-209ENST00000477554 A0A0U1RQJ8 604 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 C16orf96A6NNT2 1141 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 MYO1FO00160 1098 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 SLC31A1O15431 190 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 SLC7A4O43246 635 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 MTA2O94776 668 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 PROSCO94903 275 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 PRKCGP05129 697 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 DESP17661 470 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 ITGB7P26010 798 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 ARHGAP25P42331 645 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 CTSKP43235 329 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 GRIA4P48058 902 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 NDST2P52849 883 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 HADHBP55084 474 aaKnown RBP17.89■□□□□ 0.46
PTPN7-209ENST00000477554 CLDN2P57739 230 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 RHOAP61586 193 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 RACK1P63244 317 aaKnown RBP17.89■□□□□ 0.46
PTPN7-209ENST00000477554 ACAP1Q15027 740 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 SHBQ15464 509 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 TRIM69Q86WT6 500 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 SPATS2Q86XZ4 545 aaKnown RBP17.89■□□□□ 0.46
PTPN7-209ENST00000477554 PSTKQ8IV42 348 aaKnown RBP17.89■□□□□ 0.46
PTPN7-209ENST00000477554 CCDC114Q96M63 670 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 UBA2Q9UBT2 640 aaPredicted RBP17.89■□□□□ 0.46
PTPN7-209ENST00000477554 FADS3Q9Y5Q0 445 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 DUSP10Q9Y6W6 482 aa17.89■□□□□ 0.46
PTPN7-209ENST00000477554 TRPM6Q9BX84 2022 aa17.89■□□□□ 0.45
PTPN7-209ENST00000477554 LRRK1Q38SD2 2015 aa17.89■□□□□ 0.45
PTPN7-209ENST00000477554 USP27XA6NNY8 438 aa17.89■□□□□ 0.45
PTPN7-209ENST00000477554 RAD51BO15315 384 aa17.89■□□□□ 0.45
PTPN7-209ENST00000477554 PEX11BO96011 259 aa17.89■□□□□ 0.45
PTPN7-209ENST00000477554 ADRB1P08588 477 aa17.89■□□□□ 0.45
PTPN7-209ENST00000477554 HTR7P34969 479 aa17.89■□□□□ 0.45
PTPN7-209ENST00000477554 HCAR3P49019 387 aa17.89■□□□□ 0.45
PTPN7-209ENST00000477554 CDH6P55285 790 aa17.89■□□□□ 0.45
PTPN7-209ENST00000477554 DPYSL3Q14195 570 aa17.89■□□□□ 0.45
PTPN7-209ENST00000477554 MESDQ14696 234 aa17.89■□□□□ 0.45
PTPN7-209ENST00000477554 BOLA3Q53S33 107 aa17.89■□□□□ 0.45
PTPN7-209ENST00000477554 TEKT4Q8WW24 435 aa17.89■□□□□ 0.45
PTPN7-209ENST00000477554 GOLPH3Q9H4A6 298 aa17.89■□□□□ 0.45
PTPN7-209ENST00000477554 TRIM10Q9UDY6 481 aa17.89■□□□□ 0.45
PTPN7-209ENST00000477554 CABIN1Q9Y6J0 2220 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 MACROD2A1Z1Q3 448 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms