RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 PTGR2Q8N8N7 351 aaPredicted RBP14.77□□□□□ -0.04
HDAC6-220ENST00000477528 BTN2A3PQ96KV6 586 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 C16orf70Q9BSU1 422 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 CYTH4Q9UIA0 394 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 BLOC1S6Q9UL45 172 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 FAM50BQ9Y247 325 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 VWA7Q9Y334 891 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 EVPLLA8MZ36 301 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 E9PAM4 449 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 MATN3O15232 486 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 BUD23O43709 281 aaKnown RBP14.77□□□□□ -0.04
HDAC6-220ENST00000477528 PIK3R1P27986 724 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 NR6A1Q15406 480 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 PFKFB4Q16877 469 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 DPY19L2P1Q6NXN4 242 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 TAPT1Q6NXT6 567 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 DEFB128Q7Z7B8 93 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 HS6ST3Q8IZP7 471 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 SPATA6LQ8N4H0 392 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 NKAPQ8N5F7 415 aaKnown RBP14.77□□□□□ -0.04
HDAC6-220ENST00000477528 ABTB1Q969K4 478 aaPredicted RBP14.77□□□□□ -0.04
HDAC6-220ENST00000477528 HDAC10Q969S8 669 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 TMEM216Q9P0N5 145 aa14.77□□□□□ -0.04
HDAC6-220ENST00000477528 PRPF19Q9UMS4 504 aaKnown RBP14.77□□□□□ -0.04
HDAC6-220ENST00000477528 CXorf49A8MYA2 514 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-220ENST00000477528 TBC1D4O60343 1298 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 SNAI1O95863 264 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-220ENST00000477528 MRPS22P82650 360 aaKnown RBP14.77□□□□□ -0.05
HDAC6-220ENST00000477528 SLC18A2Q05940 514 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 ITGA7Q13683 1181 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 GTF2H3Q13889 308 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 GRM3Q14832 879 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 ARHGAP15Q53QZ3 475 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 RINLQ6ZS11 566 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 IFNLR1Q8IU57 520 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-220ENST00000477528 STK40Q8N2I9 435 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 KLHL5Q96PQ7 755 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 EMILIN2Q9BXX0 1053 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 NMRK2Q9NPI5 230 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 MCM8Q9UJA3 840 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 SLC27A5Q9Y2P5 690 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 RAD51BO15315 384 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 CLPTM1O96005 669 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 ALBP02768 609 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 RHOQP17081 205 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 CDH2P19022 906 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-220ENST00000477528 GRIA1P42261 906 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 OCA2Q04671 838 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 PPIDQ08752 370 aaKnown RBP14.77□□□□□ -0.05
HDAC6-220ENST00000477528 TBCELQ5QJ74 424 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 CHADLQ6NUI6 762 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 RTKNQ9BST9 563 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 PIGVQ9NUD9 493 aa14.77□□□□□ -0.05
HDAC6-220ENST00000477528 SIN3BO75182 1162 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 ASGR1P07306 291 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 HCAR3P49019 387 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 IL2P60568 153 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 BTKQ06187 659 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 STXBP5Q5T5C0 1151 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 SLC24A5Q71RS6 500 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 PCDH20Q8N6Y1 951 aaKnown RBP14.76□□□□□ -0.05
HDAC6-220ENST00000477528 BHLHE22Q8NFJ8 381 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-220ENST00000477528 MARK4Q96L34 752 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 NR2E3Q9Y5X4 410 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 RREB1Q92766 1687 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 TLR5O60602 858 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 OR4Q2P0C623 313 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 LBPP18428 481 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 CCNG1P51959 295 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 KLF10Q13118 480 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 PSMD5Q16401 504 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 AFTPHQ6ULP2 937 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 FAM228AQ86W67 206 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 SPPL2BQ8TCT7 592 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 SH3KBP1Q96B97 665 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 CADM1Q9BY67 442 aaKnown RBP14.76□□□□□ -0.05
HDAC6-220ENST00000477528 SLC25A13Q9UJS0 675 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 Q9Y3F1 56 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 PQBP1O60828 265 aaKnown RBP14.76□□□□□ -0.05
HDAC6-220ENST00000477528 TYMPP19971 482 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 MPSTP25325 297 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 ATN1P54259 1190 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-220ENST00000477528 CHRNB3Q05901 458 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 ZNF252P-AS1Q0IIN9 211 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 MPP2Q14168 576 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 SPATA22Q8NHS9 363 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 NPLOC4Q8TAT6 608 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 LNPEPQ9UIQ6 1025 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 TCAF1Q9Y4C2 921 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 SNX10Q9Y5X0 201 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 E7ESA3 106 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 KLF11O14901 512 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 SNRPB2P08579 225 aaKnown RBP14.76□□□□□ -0.05
HDAC6-220ENST00000477528 FAM58BPP0C7Q3 252 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 NAA20P61599 178 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 TIGD5Q53EQ6 642 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 ZYG11AQ6WRX3 759 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 KCTD14Q9BQ13 255 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-220ENST00000477528 TRMOQ9BU70 441 aa14.76□□□□□ -0.05
HDAC6-220ENST00000477528 PIRO00625 290 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms