RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 FAM172AQ8WUF8 416 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 NTAN1Q96AB6 310 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 ARHGEF26Q96DR7 871 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 KLHL32Q96NJ5 620 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 DEPDC7Q96QD5 511 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 PCDHB18PQ96TA0 734 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 OSBPL1AQ9BXW6 950 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 KLF15Q9UIH9 416 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 SIK3Q9Y2K2 1263 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 CSNK1G3Q9Y6M4 447 aa11.54□□□□□ -0.56
HDLBP-236ENST00000477477 ZSCAN5CA6NGD5 496 aaPredicted RBP11.53□□□□□ -0.56
HDLBP-236ENST00000477477 AREL1O15033 823 aa11.53□□□□□ -0.56
HDLBP-236ENST00000477477 AQP9O43315 295 aa11.53□□□□□ -0.56
HDLBP-236ENST00000477477 KDELR3O43731 214 aa11.53□□□□□ -0.56
HDLBP-236ENST00000477477 TMCC1O94876 653 aa11.53□□□□□ -0.56
HDLBP-236ENST00000477477 POP4O95707 220 aaKnown RBP11.53□□□□□ -0.56
HDLBP-236ENST00000477477 GPD1P21695 349 aa11.53□□□□□ -0.56
HDLBP-236ENST00000477477 RFC1P35251 1148 aaPredicted RBP11.53□□□□□ -0.56
HDLBP-236ENST00000477477 EIF2B5Q13144 721 aaKnown RBP11.53□□□□□ -0.56
HDLBP-236ENST00000477477 MYLK3Q32MK0 819 aa11.53□□□□□ -0.56
HDLBP-236ENST00000477477 ATXN7L2Q5T6C5 722 aaPredicted RBP11.53□□□□□ -0.56
HDLBP-236ENST00000477477 ZCCHC8Q6NZY4 707 aaKnown RBP11.53□□□□□ -0.56
HDLBP-236ENST00000477477 PHF13Q86YI8 300 aaPredicted RBP11.53□□□□□ -0.56
HDLBP-236ENST00000477477 RTL3Q8N8U3 475 aaKnown RBP11.53□□□□□ -0.56
HDLBP-236ENST00000477477 C3orf20Q8ND61 904 aa11.53□□□□□ -0.56
HDLBP-236ENST00000477477 IFI44Q8TCB0 444 aa11.53□□□□□ -0.56
HDLBP-236ENST00000477477 GDAP1L1Q96MZ0 367 aa11.53□□□□□ -0.56
HDLBP-236ENST00000477477 SELENOOQ9BVL4 669 aa11.53□□□□□ -0.56
HDLBP-236ENST00000477477 NOL6Q9H6R4 1146 aaKnown RBP11.53□□□□□ -0.56
HDLBP-236ENST00000477477 ADAM22Q9P0K1 906 aa11.53□□□□□ -0.56
HDLBP-236ENST00000477477 IPO11Q9UI26 975 aaKnown RBP11.53□□□□□ -0.56
HDLBP-236ENST00000477477 RAI2Q9Y5P3 530 aa11.53□□□□□ -0.56
HDLBP-236ENST00000477477 PTPRQQ9UMZ3 2332 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 RIOK3O14730 519 aaKnown RBP11.52□□□□□ -0.57
HDLBP-236ENST00000477477 CCP110O43303 1012 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 BUB1O43683 1085 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 LZTS3O60299 673 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-236ENST00000477477 CSO75390 466 aaKnown RBP11.52□□□□□ -0.57
HDLBP-236ENST00000477477 DXOO77932 396 aaKnown RBP11.52□□□□□ -0.57
HDLBP-236ENST00000477477 IGSF6O95976 241 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 MPOP05164 745 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 CALB1P05937 261 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 JUNDP17535 347 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 EPHB2P29323 1055 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 IGFALSP35858 605 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 GABREP78334 506 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 TLE3Q04726 772 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 CCDC173Q0VFZ6 552 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 SYCP1Q15431 976 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 CDKN3Q16667 212 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 CLEC16AQ2KHT3 1053 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 DEFB133Q30KQ1 61 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 EFHC2Q5JST6 749 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 LRRC73Q5JTD7 316 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 WDR59Q6PJI9 974 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 GDPD4Q6W3E5 623 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 MON1BQ7L1V2 547 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 SLFN11Q7Z7L1 901 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 ZNF354CQ86Y25 554 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 SPACA3Q8IXA5 215 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 PYROXD2Q8N2H3 581 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 MAPK15Q8TD08 544 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 LMX1AQ8TE12 382 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 BTN2A2Q8WVV5 523 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 CASKIN2Q8WXE0 1202 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 FCRL3Q96P31 734 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-236ENST00000477477 TTYH3Q9C0H2 523 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 KLC2Q9H0B6 622 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 ABCG4Q9H172 646 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 NCKIPSDQ9NZQ3 722 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 APOBEC3BQ9UH17 382 aaKnown RBP11.52□□□□□ -0.57
HDLBP-236ENST00000477477 SALL4Q9UJQ4 1053 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 TRPM6Q9BX84 2022 aa11.52□□□□□ -0.57
HDLBP-236ENST00000477477 MYLKQ15746 1914 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 BPTFQ12830 3046 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 TCRBV5S1A1TA0A578 114 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 EME2A4GXA9 379 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-236ENST00000477477 SIGLEC16A6NMB1 481 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 LGALS16A8MUM7 142 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 WASH4PA8MWX3 477 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 TPP1O14773 563 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 ATXN7O15265 892 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-236ENST00000477477 MMP20O60882 483 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 USP12O75317 370 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 ZNF143P52747 638 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-236ENST00000477477 THOP1P52888 689 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 COPB1P53618 953 aaKnown RBP11.51□□□□□ -0.57
HDLBP-236ENST00000477477 PCBP4P57723 403 aaKnown RBP11.51□□□□□ -0.57
HDLBP-236ENST00000477477 YBEYP58557 167 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-236ENST00000477477 RHOAP61586 193 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 RAD51Q06609 339 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 PTK2BQ14289 1009 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 INO80DQ53TQ3 878 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-236ENST00000477477 GUSBP11Q6P575 273 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 CLEC17AQ6ZS10 378 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 RBM43Q6ZSC3 357 aaKnown RBP11.51□□□□□ -0.57
HDLBP-236ENST00000477477 TTC7BQ86TV6 843 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 VPS36Q86VN1 386 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 RBFAQ8N0V3 343 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 LSMEM2Q8N112 164 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms