RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 CCDC25Q86WR0 208 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 TCP11L2Q8N4U5 519 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 TMEM217Q8N7C4 229 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 CMASQ8NFW8 434 aaPredicted RBP4.43□□□□□ -1.7
UBR3-209ENST00000477461 GABPB2Q8TAK5 448 aaPredicted RBP4.43□□□□□ -1.7
UBR3-209ENST00000477461 CLEC4CQ8WTT0 213 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 STYXQ8WUJ0 223 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 ADAMTS14Q8WXS8 1223 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 WDR77Q9BQA1 342 aaPredicted RBP4.43□□□□□ -1.7
UBR3-209ENST00000477461 MECRQ9BV79 373 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 SORBS1Q9BX66 1292 aaKnown RBP4.43□□□□□ -1.7
UBR3-209ENST00000477461 TM6SF1Q9BZW5 370 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 CDT1Q9H211 546 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 PCDHGB1Q9Y5G3 927 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 PARP4Q9UKK3 1724 aaKnown RBP4.43□□□□□ -1.7
UBR3-209ENST00000477461 KAT6BQ8WYB5 2073 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 KDRP35968 1356 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 TBC1D3DA0A087WVF3 549 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 TBC1D3IA0A087WXS9 549 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 TBC1D3EA0A087X179 549 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 TBC1D3KA0A087X1G2 549 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 TBC1D3BA6NDS4 549 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 TBC1D3FA6NER0 549 aaPredicted RBP4.42□□□□□ -1.7
UBR3-209ENST00000477461 TBC1D3LB9A6J9 549 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 SPRY3O43610 288 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 ITGA2BP08514 1039 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 TBC1D3HP0C7X1 549 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 SLC16A2P36021 539 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 CLCN5P51795 746 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 LMOD3Q0VAK6 560 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 Q0VFX4 171 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 C1orf141Q5JVX7 400 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 ZNF569Q5MCW4 686 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 OTUD1Q5VV17 481 aaPredicted RBP4.42□□□□□ -1.7
UBR3-209ENST00000477461 TBC1D3GQ6DHY5 549 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 TBC1D3CQ6IPX1 549 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 CUZD1Q86UP6 607 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 TBC1D3Q8IZP1 549 aaPredicted RBP4.42□□□□□ -1.7
UBR3-209ENST00000477461 SLC25A41Q8N5S1 370 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 NGEFQ8N5V2 710 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 STT3BQ8TCJ2 826 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 WFIKKN2Q8TEU8 576 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 PHF21BQ96EK2 531 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 ARPC5LQ9BPX5 153 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 C6orf106Q9H6K1 298 aaPredicted RBP4.42□□□□□ -1.7
UBR3-209ENST00000477461 CD93Q9NPY3 652 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 DACT1Q9NYF0 836 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 PLEKHB1Q9UF11 243 aaPredicted RBP4.42□□□□□ -1.7
UBR3-209ENST00000477461 FZD10Q9ULW2 581 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 ZBTB1Q9Y2K1 713 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 WNK3Q9BYP7 1800 aa4.42□□□□□ -1.7
UBR3-209ENST00000477461 PLEKHG2Q9H7P9 1386 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 DLG5Q8TDM6 1919 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 hCG_1642624A0A1W2PR95 340 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 TCRBV7S3A2A0A539 114 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 FAM90A18PA6NE21 464 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 GAGE12JA6NER3 117 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 FAM90A16PA6NEW6 464 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 FAM90A9PA6NNJ1 464 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 FAM90A5PA8MXJ8 464 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 ACKR2O00590 384 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 GRID2O43424 1007 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 DNPH1O43598 174 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 LIASO43766 372 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 TCEA3O75764 348 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 GAS8-AS1O95177 125 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 LARGE1O95461 756 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 IGKV3-20P01619 116 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 CYP3A4P08684 503 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 FAM90A15PP0C7V4 464 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 FAM90A14PP0C7W9 464 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 CHRNA5P30532 468 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 TNFSF8P32971 234 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 TMPOP42166 694 aaKnown RBP4.41□□□□□ -1.7
UBR3-209ENST00000477461 RIPK4P57078 832 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 SELENOVP59797 346 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 CALD1Q05682 793 aaKnown RBP4.41□□□□□ -1.7
UBR3-209ENST00000477461 CCDC38Q502W7 563 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 ATPAF1Q5TC12 328 aaPredicted RBP4.41□□□□□ -1.7
UBR3-209ENST00000477461 ERAP2Q6P179 960 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 ZNF530Q6P9A1 599 aaPredicted RBP4.41□□□□□ -1.7
UBR3-209ENST00000477461 ZNF367Q7RTV3 350 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 LRRC57Q8N9N7 239 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 VPS37AQ8NEZ2 397 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 OTUD7AQ8TE49 926 aaPredicted RBP4.41□□□□□ -1.7
UBR3-209ENST00000477461 RTKNQ9BST9 563 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 DDX23Q9BUQ8 820 aaKnown RBP4.41□□□□□ -1.7
UBR3-209ENST00000477461 PNRC2Q9NPJ4 139 aaKnown RBP4.41□□□□□ -1.7
UBR3-209ENST00000477461 PRDM8Q9NQV8 689 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 RRP7AQ9Y3A4 280 aaKnown RBP4.41□□□□□ -1.7
UBR3-209ENST00000477461 BCL9LQ86UU0 1499 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 PCDH11XQ9BZA7 1347 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 PCDH11YQ9BZA8 1340 aa4.41□□□□□ -1.7
UBR3-209ENST00000477461 OVOS2A0A0G2JMS6 1433 aa4.4□□□□□ -1.7
UBR3-209ENST00000477461 ATRNO75882 1429 aa4.4□□□□□ -1.7
UBR3-209ENST00000477461 NCAPD2Q15021 1401 aa4.4□□□□□ -1.7
UBR3-209ENST00000477461 VIRMAQ69YN4 1812 aaKnown RBP4.4□□□□□ -1.7
UBR3-209ENST00000477461 EFCAB8A8MWE9 144 aa4.4□□□□□ -1.71
UBR3-209ENST00000477461 KCNJ18B7U540 433 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms