RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 ATP11CQ8NB49 1132 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 CENPTQ96BT3 561 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 TTC25Q96NG3 672 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 OLFM3Q96PB7 478 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 TMEM245Q9H330 911 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 SP110Q9HB58 689 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 CACNA2D2Q9NY47 1150 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 DLGAP2Q9P1A6 1054 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 PRDM4Q9UKN5 801 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 STON1Q9Y6Q2 735 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 CXorf51AA0A1B0GTR3 108 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 SMAD6O43541 496 aaKnown RBP17.12■□□□□ 0.33
EPHB4-204ENST00000477446 ADAM23O75077 832 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 SHBGP04278 402 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 ABHD2P08910 425 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 SRCP12931 536 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 NNMTP40261 264 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 WASP42768 502 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 SERPINH1P50454 418 aaKnown RBP17.12■□□□□ 0.33
EPHB4-204ENST00000477446 VASPP50552 380 aaPredicted RBP17.12■□□□□ 0.33
EPHB4-204ENST00000477446 ATP1A2P50993 1020 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 MAGOHP61326 146 aaKnown RBP17.12■□□□□ 0.33
EPHB4-204ENST00000477446 IL10RBQ08334 325 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 ENPP2Q13822 863 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 PDK1Q15118 436 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 E2F5Q15329 346 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 BZW1Q7L1Q6 419 aaKnown RBP17.12■□□□□ 0.33
EPHB4-204ENST00000477446 TAOK1Q7L7X3 1001 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 KDM1BQ8NB78 822 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 TXNDC5Q8NBS9 432 aaKnown RBP17.12■□□□□ 0.33
EPHB4-204ENST00000477446 CCNYQ8ND76 341 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 ACTL9Q8TC94 416 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 HDAC11Q96DB2 347 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 LGMNQ99538 433 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 CHRDQ9H2X0 955 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 SHOC2Q9UQ13 582 aa17.12■□□□□ 0.33
EPHB4-204ENST00000477446 TTC34A8MYJ7 566 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 CHURC1-FNTBB4DL54 471 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 SGK1O00141 431 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 MCF2LO15068 1137 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 ATP9BO43861 1147 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 HLA-EP13747 358 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 PRKCHP24723 683 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 CCNCP24863 283 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 NTSR1P30989 418 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 HPDP32754 393 aaPredicted RBP17.11■□□□□ 0.33
EPHB4-204ENST00000477446 GEMIN4P57678 1058 aaKnown RBP17.11■□□□□ 0.33
EPHB4-204ENST00000477446 OTUD4Q01804 1114 aaKnown RBP17.11■□□□□ 0.33
EPHB4-204ENST00000477446 STAT4Q14765 748 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 NOMO1Q15155 1222 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 HSF5Q4G112 596 aaPredicted RBP17.11■□□□□ 0.33
EPHB4-204ENST00000477446 TNFAIP8L3Q5GJ75 292 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 B4GALNT4Q76KP1 1039 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 TRMT11Q7Z4G4 463 aaKnown RBP17.11■□□□□ 0.33
EPHB4-204ENST00000477446 ZNF366Q8N895 744 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 TSGA13Q96PP4 275 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 EPN3Q9H201 632 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 C11orf16Q9NQ32 467 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 UBA2Q9UBT2 640 aaPredicted RBP17.11■□□□□ 0.33
EPHB4-204ENST00000477446 FAM86C2PA6NEL3 165 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 PPP1R12AO14974 1030 aaPredicted RBP17.11■□□□□ 0.33
EPHB4-204ENST00000477446 PEX11BO96011 259 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 LSP1P33241 339 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 VPS41P49754 854 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 PPIDQ08752 370 aaKnown RBP17.11■□□□□ 0.33
EPHB4-204ENST00000477446 GPS1Q13098 491 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 DLG2Q15700 870 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 ACCSLQ4AC99 568 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 INO80DQ53TQ3 878 aaPredicted RBP17.11■□□□□ 0.33
EPHB4-204ENST00000477446 SDE2Q6IQ49 451 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 ZC3H18Q86VM9 953 aaKnown RBP17.11■□□□□ 0.33
EPHB4-204ENST00000477446 FBXL6Q8N531 539 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 BCAS4Q8TDM0 211 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 FRS2Q8WU20 508 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 GABRG3Q99928 467 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 FAM118BQ9BPY3 351 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 ZMYND15Q9H091 742 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 MTG2Q9H4K7 406 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 PPCSQ9HAB8 311 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 POLR3BQ9NW08 1133 aaPredicted RBP17.11■□□□□ 0.33
EPHB4-204ENST00000477446 MMP17Q9ULZ9 603 aa17.11■□□□□ 0.33
EPHB4-204ENST00000477446 FCF1Q9Y324 198 aaKnown RBP17.11■□□□□ 0.33
EPHB4-204ENST00000477446 TLDC2A0PJX2 215 aa17.1■□□□□ 0.33
EPHB4-204ENST00000477446 ATG13O75143 517 aa17.1■□□□□ 0.33
EPHB4-204ENST00000477446 VAV1P15498 845 aa17.1■□□□□ 0.33
EPHB4-204ENST00000477446 MTAPQ13126 283 aa17.1■□□□□ 0.33
EPHB4-204ENST00000477446 KCTD19Q17RG1 926 aaPredicted RBP17.1■□□□□ 0.33
EPHB4-204ENST00000477446 EOGTQ5NDL2 527 aa17.1■□□□□ 0.33
EPHB4-204ENST00000477446 TIGD7Q6NT04 549 aaPredicted RBP17.1■□□□□ 0.33
EPHB4-204ENST00000477446 RIBC1Q8N443 379 aaPredicted RBP17.1■□□□□ 0.33
EPHB4-204ENST00000477446 TMEM105Q8N8V8 129 aa17.1■□□□□ 0.33
EPHB4-204ENST00000477446 BRD8Q9H0E9 1235 aa17.1■□□□□ 0.33
EPHB4-204ENST00000477446 C2orf42Q9NWW7 574 aa17.1■□□□□ 0.33
EPHB4-204ENST00000477446 CKAP5Q14008 2032 aa17.1■□□□□ 0.33
EPHB4-204ENST00000477446 CFAP69A5D8W1 941 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 MATN3O15232 486 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 ZNF821O75541 412 aaPredicted RBP17.09■□□□□ 0.33
EPHB4-204ENST00000477446 TMCC1O94876 653 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 EPHX1P07099 455 aa17.09■□□□□ 0.33
EPHB4-204ENST00000477446 MAGEA4P43358 317 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms