RNA–Protein interactions for RNA: ENST00000477345.1

TPRN-203, Transcript of taperin, humanhuman

TSL 1 (best)

Gene TPRN, Length 3,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-203ENST00000477345 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.09□□□□□ -0.31
TPRN-203ENST00000477345 TSR3Q9UJK0 312 aaKnown RBP13.09□□□□□ -0.31
TPRN-203ENST00000477345 MYRFQ9Y2G1 1151 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 FNDC3AQ9Y2H6 1198 aaKnown RBP13.09□□□□□ -0.31
TPRN-203ENST00000477345 SNTNA6NMZ2 147 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 MICAL2O94851 1124 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 H6PDO95479 791 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 GNAO1P09471 354 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 PSMB4P28070 264 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 CCND2P30279 289 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 RABGGTBP53611 331 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 PHC1P78364 1004 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 USP10Q14694 798 aaKnown RBP13.09□□□□□ -0.31
TPRN-203ENST00000477345 STILQ15468 1287 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 DCAF15Q66K64 600 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 CNDP1Q96KN2 507 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 KLHL32Q96NJ5 620 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 CGRRF1Q99675 332 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 SLC29A1Q99808 456 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 MTG1Q9BT17 334 aaPredicted RBP13.09□□□□□ -0.31
TPRN-203ENST00000477345 GCOM2Q9BZD3 368 aaPredicted RBP13.09□□□□□ -0.31
TPRN-203ENST00000477345 ILKAPQ9H0C8 392 aaPredicted RBP13.09□□□□□ -0.31
TPRN-203ENST00000477345 SSU72Q9NP77 194 aaKnown RBP13.09□□□□□ -0.31
TPRN-203ENST00000477345 SNX15Q9NRS6 342 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 UBIAD1Q9Y5Z9 338 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 VAPBO95292 243 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 CRHR1P34998 444 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 KCNJ11Q14654 390 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 OXA1LQ15070 435 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.09□□□□□ -0.31
TPRN-203ENST00000477345 TP53INP2Q8IXH6 220 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 TERB1Q8NA31 727 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 OR9I1Q8NGQ6 314 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 NSUN6Q8TEA1 469 aaKnown RBP13.09□□□□□ -0.31
TPRN-203ENST00000477345 ZNF486Q96H40 463 aaPredicted RBP13.09□□□□□ -0.31
TPRN-203ENST00000477345 RNF157Q96PX1 679 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 SNRNP25Q9BV90 132 aaKnown RBP13.09□□□□□ -0.31
TPRN-203ENST00000477345 BCAP29Q9UHQ4 241 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 CDY2AQ9Y6F7 541 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 CDY1Q9Y6F8 540 aa13.09□□□□□ -0.31
TPRN-203ENST00000477345 HAT1O14929 419 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 CCNT2O60583 730 aaKnown RBP13.08□□□□□ -0.32
TPRN-203ENST00000477345 ITGBL1O95965 494 aaPredicted RBP13.08□□□□□ -0.32
TPRN-203ENST00000477345 CXCR2P25025 360 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 GNG2P59768 71 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 PPP2R2BQ00005 443 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 ADGRE1Q14246 886 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 NOMO1Q15155 1222 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 FGD3Q5JSP0 725 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 GALNT18Q6P9A2 607 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 C16orf89Q6UX73 402 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 PCDH19Q8TAB3 1148 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 LPAR1Q92633 364 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 COPS5Q92905 334 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 MFSD3Q96ES6 412 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 SEPHS2Q99611 448 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 NAA50Q9GZZ1 169 aaKnown RBP13.08□□□□□ -0.32
TPRN-203ENST00000477345 C1orf21Q9H246 121 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 POLR1BQ9H9Y6 1135 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 CHST12Q9NRB3 414 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 CDH7Q9ULB5 785 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 AP4S1Q9Y587 144 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 CPQQ9Y646 472 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 HCRTO43612 131 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 INHBBP09529 407 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 PRKCAP17252 672 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 GARSP41250 739 aaKnown RBP13.08□□□□□ -0.32
TPRN-203ENST00000477345 CXCR3P49682 368 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 TBCCQ15814 346 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 ARL13AQ5H913 290 aaPredicted RBP13.08□□□□□ -0.32
TPRN-203ENST00000477345 FAM183BPQ6ZVS7 135 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 UBR7Q8N806 425 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 CLEC4CQ8WTT0 213 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 PSD2Q9BQI7 771 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 DHRS4Q9BTZ2 278 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 ZNF302Q9NR11 478 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 ANKMY1Q9P2S6 941 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 SLC30A1Q9Y6M5 507 aa13.08□□□□□ -0.32
TPRN-203ENST00000477345 SPAG6O75602 509 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 RGS20O76081 388 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 MYCP01106 439 aaPredicted RBP13.07□□□□□ -0.32
TPRN-203ENST00000477345 CAPN1P07384 714 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 NCAM1P13591 858 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 GABRB2P47870 512 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 GRIA4P48058 902 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 ZNF135P52742 658 aaPredicted RBP13.07□□□□□ -0.32
TPRN-203ENST00000477345 CHRNEQ04844 493 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 SPCS2Q15005 226 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 STK11Q15831 433 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 PGS1Q32NB8 556 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 DRICH1Q6PGQ1 229 aaPredicted RBP13.07□□□□□ -0.32
TPRN-203ENST00000477345 TMEM26Q6ZUK4 368 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 IGFN1Q86VF2 1251 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 GALNT6Q8NCL4 622 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 ACVR1CQ8NER5 493 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 BPIFB6Q8NFQ5 453 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 VPS35Q96QK1 796 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 PSKH2Q96QS6 385 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 DHRS9Q9BPW9 319 aa13.07□□□□□ -0.32
TPRN-203ENST00000477345 GATA5Q9BWX5 397 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms