RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 TTC39BQ5VTQ0 682 aaPredicted RBP15.59■□□□□ 0.09
SMG5-204ENST00000476954 LVRNQ6Q4G3 990 aa15.59■□□□□ 0.09
SMG5-204ENST00000476954 SHC4Q6S5L8 630 aa15.59■□□□□ 0.09
SMG5-204ENST00000476954 INTS8Q75QN2 995 aaKnown RBP15.59■□□□□ 0.09
SMG5-204ENST00000476954 FAM114A1Q8IWE2 563 aa15.59■□□□□ 0.09
SMG5-204ENST00000476954 FAM186BQ8IYM0 893 aa15.59■□□□□ 0.09
SMG5-204ENST00000476954 UBR7Q8N806 425 aa15.59■□□□□ 0.09
SMG5-204ENST00000476954 ATP6V0D2Q8N8Y2 350 aa15.59■□□□□ 0.09
SMG5-204ENST00000476954 ZSCAN16Q9H4T2 348 aaPredicted RBP15.59■□□□□ 0.09
SMG5-204ENST00000476954 PRDM8Q9NQV8 689 aa15.59■□□□□ 0.09
SMG5-204ENST00000476954 RAB20Q9NX57 234 aa15.59■□□□□ 0.09
SMG5-204ENST00000476954 MORC2Q9Y6X9 1032 aaPredicted RBP15.59■□□□□ 0.09
SMG5-204ENST00000476954 APCP25054 2843 aa15.59■□□□□ 0.09
SMG5-204ENST00000476954 SYNJ2BP-COX16A0A087WUM0 186 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 LOC101059948A0A1B0GTJ6 334 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 EFCAB7A8K855 629 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 M0QYV0 167 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 MAPK13O15264 365 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 B4GAT1O43505 415 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 FBXO21O94952 628 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 ALPIP09923 528 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 KRT13P13646 458 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 GKP32189 559 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 CUL2Q13617 745 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 AUHQ13825 339 aaKnown RBP15.58■□□□□ 0.08
SMG5-204ENST00000476954 LRRC73Q5JTD7 316 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 FBXL13Q8NEE6 735 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 ASB12Q8WXK4 309 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 ART4Q93070 314 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 FAXDC2Q96IV6 333 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 PPP1R9BQ96SB3 815 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 NUDT22Q9BRQ3 303 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 GPN2Q9H9Y4 310 aaPredicted RBP15.58■□□□□ 0.08
SMG5-204ENST00000476954 CUEDC1Q9NWM3 386 aaPredicted RBP15.58■□□□□ 0.08
SMG5-204ENST00000476954 COX16Q9P0S2 106 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 LRIT1Q9P2V4 623 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 PCDHGA3Q9Y5H0 932 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 MTORP42345 2549 aa15.58■□□□□ 0.08
SMG5-204ENST00000476954 ANKRD36A6QL64 1941 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 HIVEP1P15822 2718 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 A0A0D9SEW6 157 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 TTLL8A6PVC2 850 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 NEMP1O14524 444 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 POLR2DO15514 142 aaKnown RBP15.57■□□□□ 0.08
SMG5-204ENST00000476954 TSPAN6O43657 245 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 EIF5BO60841 1220 aaKnown RBP15.57■□□□□ 0.08
SMG5-204ENST00000476954 GLB1P16278 677 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 PDCP20941 246 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 NR2F2P24468 414 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 BRD2P25440 801 aaKnown RBP15.57■□□□□ 0.08
SMG5-204ENST00000476954 MXI1P50539 228 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 YPEL5P62699 121 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 B4GALNT1Q00973 533 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 EIF4EBP2Q13542 120 aaPredicted RBP15.57■□□□□ 0.08
SMG5-204ENST00000476954 AMZ1Q400G9 498 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 C16orf46Q6P387 395 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 GKN2Q86XP6 184 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 EFCAB3Q8N7B9 438 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 OR6C4Q8NGE1 309 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 TBC1D30Q9Y2I9 924 aa15.57■□□□□ 0.08
SMG5-204ENST00000476954 C16orf96A6NNT2 1141 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 RNF225M0QZC1 329 aaPredicted RBP15.56■□□□□ 0.08
SMG5-204ENST00000476954 MMP20O60882 483 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 PDGFAP04085 211 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 ITIH2P19823 946 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 DNA2P51530 1060 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 OR1D5P58170 312 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 KRT83P78385 493 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 LRMPQ12912 555 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 STK38Q15208 465 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 TAF5Q15542 800 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 EIF2S3LQ2VIR3 472 aaKnown RBP15.56■□□□□ 0.08
SMG5-204ENST00000476954 ALFQ53S48 1182 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 ASB18Q6ZVZ8 466 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 TP53I13Q8NBR0 393 aaPredicted RBP15.56■□□□□ 0.08
SMG5-204ENST00000476954 OR6K2Q8NGY2 324 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 CPT1CQ8TCG5 803 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 HSFY1Q96LI6 401 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 CCDC74BQ96LY2 380 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 HEPHQ9BQS7 1158 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 ZDHHC6Q9H6R6 413 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.56■□□□□ 0.08
SMG5-204ENST00000476954 AKAP7Q9P0M2 348 aaPredicted RBP15.56■□□□□ 0.08
SMG5-204ENST00000476954 TRAF3IP3Q9Y228 551 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 ACTL7AQ9Y615 435 aa15.56■□□□□ 0.08
SMG5-204ENST00000476954 PDZD2O15018 2839 aa15.55■□□□□ 0.08
SMG5-204ENST00000476954 IGHV5-10-1A0A0J9YXX1 117 aa15.55■□□□□ 0.08
SMG5-204ENST00000476954 CALUO43852 315 aaPredicted RBP15.55■□□□□ 0.08
SMG5-204ENST00000476954 RASGRP1O95267 797 aa15.55■□□□□ 0.08
SMG5-204ENST00000476954 CPNE6O95741 557 aa15.55■□□□□ 0.08
SMG5-204ENST00000476954 DDAH2O95865 285 aa15.55■□□□□ 0.08
SMG5-204ENST00000476954 RHOCP08134 193 aa15.55■□□□□ 0.08
SMG5-204ENST00000476954 NASPP49321 788 aaPredicted RBP15.55■□□□□ 0.08
SMG5-204ENST00000476954 BLKP51451 505 aa15.55■□□□□ 0.08
SMG5-204ENST00000476954 CCNHP51946 323 aaPredicted RBP15.55■□□□□ 0.08
SMG5-204ENST00000476954 SEPT6Q14141 434 aa15.55■□□□□ 0.08
SMG5-204ENST00000476954 ARHGEF7Q14155 803 aa15.55■□□□□ 0.08
SMG5-204ENST00000476954 IRF4Q15306 451 aa15.55■□□□□ 0.08
SMG5-204ENST00000476954 OGFOD3Q6PK18 319 aa15.55■□□□□ 0.08
SMG5-204ENST00000476954 ENPP7Q6UWV6 458 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms