RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 PRKD1Q15139 912 aaPredicted RBP29.93■■■□□ 2.38
HOXB3-208ENST00000476342 ZNF805Q5CZA5 627 aa29.93■■■□□ 2.38
HOXB3-208ENST00000476342 PMS2CLQ68D20 193 aa29.93■■■□□ 2.38
HOXB3-208ENST00000476342 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP29.93■■■□□ 2.38
HOXB3-208ENST00000476342 SLC35F6Q8N357 371 aa29.93■■■□□ 2.38
HOXB3-208ENST00000476342 PGBD5Q8N414 524 aa29.93■■■□□ 2.38
HOXB3-208ENST00000476342 NKD2Q969F2 451 aaPredicted RBP29.93■■■□□ 2.38
HOXB3-208ENST00000476342 ARRDC3Q96B67 414 aa29.93■■■□□ 2.38
HOXB3-208ENST00000476342 NUDCD1Q96RS6 583 aa29.93■■■□□ 2.38
HOXB3-208ENST00000476342 DUSP15Q9H1R2 295 aaPredicted RBP29.93■■■□□ 2.38
HOXB3-208ENST00000476342 ATP13A3Q9H7F0 1226 aa29.93■■■□□ 2.38
HOXB3-208ENST00000476342 TTLL3Q9Y4R7 772 aa29.93■■■□□ 2.38
HOXB3-208ENST00000476342 ANKRD36A6QL64 1941 aa29.93■■■□□ 2.38
HOXB3-208ENST00000476342 CEP192Q8TEP8 1941 aa29.93■■■□□ 2.38
HOXB3-208ENST00000476342 PROB1E7EW31 1015 aa29.92■■■□□ 2.38
HOXB3-208ENST00000476342 INSIG1O15503 277 aa29.92■■■□□ 2.38
HOXB3-208ENST00000476342 MTSS1O43312 755 aa29.92■■■□□ 2.38
HOXB3-208ENST00000476342 ACSL1P33121 698 aa29.92■■■□□ 2.38
HOXB3-208ENST00000476342 MAXP61244 160 aa29.92■■■□□ 2.38
HOXB3-208ENST00000476342 ITKQ08881 620 aa29.92■■■□□ 2.38
HOXB3-208ENST00000476342 KLF1Q13351 362 aaPredicted RBP29.92■■■□□ 2.38
HOXB3-208ENST00000476342 ERN2Q76MJ5 926 aaKnown RBP29.92■■■□□ 2.38
HOXB3-208ENST00000476342 FAM131CQ96AQ9 280 aa29.92■■■□□ 2.38
HOXB3-208ENST00000476342 IL12RB2Q99665 862 aa29.92■■■□□ 2.38
HOXB3-208ENST00000476342 GPR174Q9BXC1 333 aa29.92■■■□□ 2.38
HOXB3-208ENST00000476342 HDAC8Q9BY41 377 aa29.92■■■□□ 2.38
HOXB3-208ENST00000476342 SCUBE2Q9NQ36 999 aa29.92■■■□□ 2.38
HOXB3-208ENST00000476342 NUMA1Q14980 2115 aa29.92■■■□□ 2.38
HOXB3-208ENST00000476342 ENC1O14682 589 aa29.91■■■□□ 2.38
HOXB3-208ENST00000476342 SEMA4FO95754 770 aa29.91■■■□□ 2.38
HOXB3-208ENST00000476342 CR2P20023 1033 aa29.91■■■□□ 2.38
HOXB3-208ENST00000476342 SERPINA4P29622 427 aa29.91■■■□□ 2.38
HOXB3-208ENST00000476342 NEK3P51956 506 aa29.91■■■□□ 2.38
HOXB3-208ENST00000476342 ZNF419Q96HQ0 510 aaPredicted RBP29.91■■■□□ 2.38
HOXB3-208ENST00000476342 ZNF641Q96N77 438 aaPredicted RBP29.91■■■□□ 2.38
HOXB3-208ENST00000476342 KLHL32Q96NJ5 620 aa29.91■■■□□ 2.38
HOXB3-208ENST00000476342 QKIQ96PU8 341 aaKnown RBP eCLIP29.91■■■□□ 2.385e-6■■■■□ 24.8
HOXB3-208ENST00000476342 FERMT1Q9BQL6 677 aa29.91■■■□□ 2.38
HOXB3-208ENST00000476342 SEPT10Q9P0V9 454 aa29.91■■■□□ 2.38
HOXB3-208ENST00000476342 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP29.9■■■□□ 2.38
HOXB3-208ENST00000476342 H7C0C1 242 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 RNF103O00237 685 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 PIGNO95427 931 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 JCHAINP01591 159 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 LMNAP02545 664 aaKnown RBP29.9■■■□□ 2.38
HOXB3-208ENST00000476342 CES1P23141 567 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 ATP5OP48047 213 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 BCL2L1Q07817 233 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 LPAL2Q16609 132 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 SLC45A4Q5BKX6 768 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 CFAP58Q5T655 872 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 AGBL4Q5VU57 503 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 TMEFF1Q8IYR6 380 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 OR14C36Q8NHC7 312 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 FOXJ1Q92949 421 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 PCED1AQ9H1Q7 454 aa29.9■■■□□ 2.38
HOXB3-208ENST00000476342 LRRC72A6NJI9 287 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 PLK4O00444 970 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 HLA-DQB2P05538 268 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 ADPRHP54922 357 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 EIF3EP60228 445 aaKnown RBP29.89■■■□□ 2.38
HOXB3-208ENST00000476342 ZBTB17Q13105 803 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 ALG1LQ6GMV1 187 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 FBXL19Q6PCT2 694 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 B4GALNT4Q76KP1 1039 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 PARS2Q7L3T8 475 aaKnown RBP29.89■■■□□ 2.38
HOXB3-208ENST00000476342 SLC13A5Q86YT5 568 aaPredicted RBP29.89■■■□□ 2.38
HOXB3-208ENST00000476342 SUMF1Q8NBK3 374 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 CADM4Q8NFZ8 388 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 HCAR2Q8TDS4 363 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 VOPP1Q96AW1 172 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 KDM4CQ9H3R0 1056 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 SUV39H2Q9H5I1 410 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 KCND1Q9NSA2 647 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 DKK3Q9UBP4 350 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 ATP8A1Q9Y2Q0 1164 aa29.89■■■□□ 2.38
HOXB3-208ENST00000476342 C16orf96A6NNT2 1141 aa29.88■■■□□ 2.37
HOXB3-208ENST00000476342 ZNF189O75820 626 aaPredicted RBP29.88■■■□□ 2.37
HOXB3-208ENST00000476342 PIP5KL1Q5T9C9 394 aa29.88■■■□□ 2.37
HOXB3-208ENST00000476342 LAIR1Q6GTX8 287 aa29.88■■■□□ 2.37
HOXB3-208ENST00000476342 NCEH1Q6PIU2 408 aa29.88■■■□□ 2.37
HOXB3-208ENST00000476342 CDKL3Q8IVW4 592 aaPredicted RBP29.88■■■□□ 2.37
HOXB3-208ENST00000476342 OR2T34Q8NGX1 318 aa29.88■■■□□ 2.37
HOXB3-208ENST00000476342 SEMA3CQ99985 751 aa29.88■■■□□ 2.37
HOXB3-208ENST00000476342 PLRG1O43660 514 aaKnown RBP29.88■■■□□ 2.37
HOXB3-208ENST00000476342 RBP3P10745 1247 aa29.88■■■□□ 2.37
HOXB3-208ENST00000476342 ADRB3P13945 408 aa29.88■■■□□ 2.37
HOXB3-208ENST00000476342 DHPSP49366 369 aaPredicted RBP29.88■■■□□ 2.37
HOXB3-208ENST00000476342 TEX44Q53QW1 395 aa29.88■■■□□ 2.37
HOXB3-208ENST00000476342 CAMK1DQ8IU85 385 aa29.88■■■□□ 2.37
HOXB3-208ENST00000476342 PAF1Q8N7H5 531 aa29.88■■■□□ 2.37
HOXB3-208ENST00000476342 HTR3CQ8WXA8 447 aa29.88■■■□□ 2.37
HOXB3-208ENST00000476342 LOXL4Q96JB6 756 aa29.88■■■□□ 2.37
HOXB3-208ENST00000476342 VAT1Q99536 393 aa29.88■■■□□ 2.37
HOXB3-208ENST00000476342 NOD2Q9HC29 1040 aa29.88■■■□□ 2.37
HOXB3-208ENST00000476342 SDK1Q7Z5N4 2213 aa29.87■■■□□ 2.37
HOXB3-208ENST00000476342 FAM47DPA6NHR8 397 aa29.87■■■□□ 2.37
HOXB3-208ENST00000476342 GJB3O75712 270 aa29.87■■■□□ 2.37
HOXB3-208ENST00000476342 BRAT1Q6PJG6 821 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms