RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 TCTN1Q2MV58 587 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 MARC1Q5VT66 337 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 ULK2Q8IYT8 1036 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 FSTL5Q8N475 847 aaPredicted RBP16.83■□□□□ 0.28
TVP23B-202ENST00000476139 CASD1Q96PB1 797 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 OXSMQ9NWU1 459 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 PCDHB12Q9Y5F1 795 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 MYO16Q9Y6X6 1858 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 WASH4PA8MWX3 477 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 SYN3O14994 580 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 MYCP01106 439 aaPredicted RBP16.83■□□□□ 0.28
TVP23B-202ENST00000476139 DNAJB2P25686 324 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 EPHB1P54762 984 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 NRG1Q02297 640 aaPredicted RBP16.83■□□□□ 0.28
TVP23B-202ENST00000476139 HNRNPDQ14103 355 aaKnown RBP16.83■□□□□ 0.28
TVP23B-202ENST00000476139 KDELC1Q6UW63 502 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 NXNL1Q96CM4 212 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 SCYL1Q96KG9 808 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 MARCH5Q9NX47 278 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 IL37Q9NZH6 218 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 PCDHB7Q9Y5E2 793 aa16.83■□□□□ 0.28
TVP23B-202ENST00000476139 VWA8A3KMH1 1905 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 SLC12A8A0AV02 714 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 SLC2A3P11169 496 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 CD1EP15812 388 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 RHOQP17081 205 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 SLC11A1P49279 550 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 RENBPP51606 427 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 DLG1Q12959 904 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 SLC9B1Q4ZJI4 515 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 C1orf146Q5VVC0 180 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 CNSTQ6PJW8 725 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 CNTN4Q8IWV2 1026 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 KBTBD2Q8IY47 623 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 G3BP2Q9UN86 482 aaKnown RBP16.82■□□□□ 0.28
TVP23B-202ENST00000476139 FAM95CA0A1B0GW59 222 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 MTMR11A4FU01 709 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 INHAP05111 366 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 MMP2P08253 660 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 NAGLUP54802 743 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 NOGQ13253 232 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 CFAP52Q8N1V2 620 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 PGBD5Q8N414 524 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 SLC43A3Q8NBI5 491 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 CCDC124Q96CT7 223 aaKnown RBP16.82■□□□□ 0.28
TVP23B-202ENST00000476139 IMP4Q96G21 291 aaKnown RBP16.82■□□□□ 0.28
TVP23B-202ENST00000476139 BTN2A3PQ96KV6 586 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 NDNQ99608 321 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 YIPF3Q9GZM5 350 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 SLC25A51Q9H1U9 297 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 TMEM248Q9NWD8 314 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 PACSIN3Q9UKS6 424 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 PLA2G4CQ9UP65 541 aa16.82■□□□□ 0.28
TVP23B-202ENST00000476139 PDE5AO76074 875 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 AOC1P19801 751 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 SLC12A1Q13621 1099 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 LRRC36Q1X8D7 754 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 PRSS55Q6UWB4 352 aaPredicted RBP16.81■□□□□ 0.28
TVP23B-202ENST00000476139 LMNTD2Q8IXW0 634 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 PHTF2Q8N3S3 785 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 RPRD1AQ96P16 312 aaPredicted RBP16.81■□□□□ 0.28
TVP23B-202ENST00000476139 SIKE1Q9BRV8 207 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 PPP1R12CQ9BZL4 782 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 ACOT9Q9Y305 439 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 TET1Q8NFU7 2136 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 FRMPD3Q5JV73 1810 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 FAM92AA1XBS5 289 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 E9PBE3 544 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 ARVCFO00192 962 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 KLHL41O60662 606 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 LUC7L3O95232 432 aaKnown RBP16.81■□□□□ 0.28
TVP23B-202ENST00000476139 ACVRL1P37023 503 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 MAGEA11P43364 429 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 GRIA4P48058 902 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 KCNQ1P51787 676 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 NDST2P52849 883 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 TAS2R39P59534 338 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 TMEM154Q6P9G4 183 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 LDB1Q86U70 411 aaPredicted RBP16.81■□□□□ 0.28
TVP23B-202ENST00000476139 ELMO2Q96JJ3 720 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 SP110Q9HB58 689 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 FBXO5Q9UKT4 447 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 RPL26L1Q9UNX3 145 aaKnown RBP16.81■□□□□ 0.28
TVP23B-202ENST00000476139 ACTL7AQ9Y615 435 aa16.81■□□□□ 0.28
TVP23B-202ENST00000476139 GOLGA8QA0A0J9YX86 632 aa16.8■□□□□ 0.28
TVP23B-202ENST00000476139 GOLGA8OA6NCC3 632 aa16.8■□□□□ 0.28
TVP23B-202ENST00000476139 GOLGA8NF8WBI6 632 aa16.8■□□□□ 0.28
TVP23B-202ENST00000476139 SELPP16109 830 aa16.8■□□□□ 0.28
TVP23B-202ENST00000476139 RAB10P61026 200 aa16.8■□□□□ 0.28
TVP23B-202ENST00000476139 RBM20Q5T481 1227 aaKnown RBP16.8■□□□□ 0.28
TVP23B-202ENST00000476139 NEPROQ6NW34 567 aa16.8■□□□□ 0.28
TVP23B-202ENST00000476139 LRRC49Q8IUZ0 686 aa16.8■□□□□ 0.28
TVP23B-202ENST00000476139 ARHGAP18Q8N392 663 aa16.8■□□□□ 0.28
TVP23B-202ENST00000476139 TDRD5Q8NAT2 981 aaKnown RBP16.8■□□□□ 0.28
TVP23B-202ENST00000476139 SGF29Q96ES7 293 aa16.8■□□□□ 0.28
TVP23B-202ENST00000476139 GPR78Q96P69 363 aa16.8■□□□□ 0.28
TVP23B-202ENST00000476139 CDH19Q9H159 772 aa16.8■□□□□ 0.28
TVP23B-202ENST00000476139 WDR55Q9H6Y2 383 aaPredicted RBP16.8■□□□□ 0.28
TVP23B-202ENST00000476139 TLR8Q9NR97 1041 aaKnown RBP16.8■□□□□ 0.28
TVP23B-202ENST00000476139 DNAJC28Q9NX36 388 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms