RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 PCDHGC4Q9Y5F7 938 aa18.33■□□□□ 0.52
ATG4B-217ENST00000475693 NFATC1O95644 943 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 ASGR2P07307 311 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 MGAT1P26572 445 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 SSTR1P30872 391 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 WNT3AP56704 352 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 CCDC38Q502W7 563 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 MBLAC2Q68D91 279 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 C4orf22Q6V702 233 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 ETFBKMTQ8IXQ9 262 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 PDIK1LQ8N165 341 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 ARL8AQ96BM9 186 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 PSKH2Q96QS6 385 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 TRMT61BQ9BVS5 477 aaKnown RBP18.32■□□□□ 0.52
ATG4B-217ENST00000475693 YY1AP1Q9H869 796 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 LHX3Q9UBR4 397 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 SEPT3Q9UH03 358 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 DENND4AQ7Z401 1863 aa18.32■□□□□ 0.52
ATG4B-217ENST00000475693 A0A0U1RQS6 177 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 GJA4P35212 333 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 HTR4Q13639 388 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 ACCSLQ4AC99 568 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 KDELC1Q6UW63 502 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 CENPUQ71F23 418 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 YTHDF3Q7Z739 585 aaKnown RBP18.31■□□□□ 0.52
ATG4B-217ENST00000475693 DNAAF3Q8N9W5 541 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 FATE1Q969F0 183 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 ZNF599Q96NL3 588 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 POLR1EQ9GZS1 481 aaKnown RBP18.31■□□□□ 0.52
ATG4B-217ENST00000475693 OBP2AQ9NY56 170 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 FBXO10Q9UK96 956 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 HOXC11O43248 304 aaPredicted RBP18.31■□□□□ 0.52
ATG4B-217ENST00000475693 PRKCGP05129 697 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 SRCP12931 536 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 SERPINH1P50454 418 aaKnown RBP18.31■□□□□ 0.52
ATG4B-217ENST00000475693 GPX6P59796 221 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 RHOAP61586 193 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 PRPSAP1Q14558 356 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 PPP1R21Q6ZMI0 780 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 SIGLEC10Q96LC7 697 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 MGME1Q9BQP7 344 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 PLAC1Q9HBJ0 212 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 SYBUQ9NX95 663 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 IL1RAPL1Q9NZN1 696 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 PLAAQ9Y263 795 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 MAD1L1Q9Y6D9 718 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 F5P12259 2224 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 ATG2BQ96BY7 2078 aa18.31■□□□□ 0.52
ATG4B-217ENST00000475693 ALOX15BO15296 676 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 RIPK2O43353 540 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 ATP9BO43861 1147 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 PLK1P53350 603 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 HABP4Q5JVS0 413 aaKnown RBP18.3■□□□□ 0.52
ATG4B-217ENST00000475693 DENND5AQ6IQ26 1287 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 UNC5BQ8IZJ1 945 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 MCUQ8NE86 351 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 CFAP36Q96G28 342 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 NECTIN4Q96NY8 510 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 MIA3Q5JRA6 1907 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 HMGB1P1B2RPK0 211 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-217ENST00000475693 ARNTLO00327 626 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 PDHA1P08559 390 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 PIRTP0C851 137 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 CR2P20023 1033 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 ADRA1AP35348 466 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 OPRD1P41143 372 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 MAGEA3P43357 314 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 ECT2LQ008S8 904 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 GALNT3Q14435 633 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 PDGFRLQ15198 375 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 RETSATQ6NUM9 610 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 CASC4Q6P4E1 433 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 LRRC8BQ6P9F7 803 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 LRIG3Q6UXM1 1119 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 ACDQ96AP0 544 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 XPO6Q96QU8 1125 aaKnown RBP18.3■□□□□ 0.52
ATG4B-217ENST00000475693 TBL1YQ9BQ87 522 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 FSD1LQ9BXM9 530 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 PABPC3Q9H361 631 aaKnown RBP18.3■□□□□ 0.52
ATG4B-217ENST00000475693 BRD9Q9H8M2 597 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 EPS15L1Q9UBC2 864 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 EVLQ9UI08 416 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-217ENST00000475693 CHKBQ9Y259 395 aa18.3■□□□□ 0.52
ATG4B-217ENST00000475693 TTC34A8MYJ7 566 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 WASH3PC4AMC7 463 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 SLMAPQ14BN4 828 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 SWT1Q5T5J6 900 aaKnown RBP18.29■□□□□ 0.52
ATG4B-217ENST00000475693 HOMEZQ8IX15 550 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 PYROXD1Q8WU10 500 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 PDCD6IPQ8WUM4 868 aaKnown RBP18.29■□□□□ 0.52
ATG4B-217ENST00000475693 HLA-CQ95604 372 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 MRRFQ96E11 262 aaKnown RBP18.29■□□□□ 0.52
ATG4B-217ENST00000475693 SCUBE2Q9NQ36 999 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 AAR2Q9Y312 384 aaKnown RBP18.29■□□□□ 0.52
ATG4B-217ENST00000475693 TEX264Q9Y6I9 313 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 SMIM23A6NLE4 172 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 E7ESA3 106 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 ANHXE9PGG2 379 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 NDUFAB1O14561 156 aa18.29■□□□□ 0.52
ATG4B-217ENST00000475693 ECI2O75521 394 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms