RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CHRNDQ07001 517 aa6.69□□□□□ -1.34
SMC5-203ENST00000475540 BIRC3Q13489 604 aa6.69□□□□□ -1.34
SMC5-203ENST00000475540 MYBPC2Q14324 1141 aa6.69□□□□□ -1.34
SMC5-203ENST00000475540 ASIC2Q16515 512 aa6.69□□□□□ -1.34
SMC5-203ENST00000475540 C8orf82Q6P1X6 216 aaPredicted RBP6.69□□□□□ -1.34
SMC5-203ENST00000475540 ZNF354CQ86Y25 554 aa6.69□□□□□ -1.34
SMC5-203ENST00000475540 RFWD2Q8NHY2 731 aa6.69□□□□□ -1.34
SMC5-203ENST00000475540 YME1L1Q96TA2 773 aa6.69□□□□□ -1.34
SMC5-203ENST00000475540 TM6SF1Q9BZW5 370 aa6.69□□□□□ -1.34
SMC5-203ENST00000475540 TRIP12Q14669 1992 aaPredicted RBP6.69□□□□□ -1.34
SMC5-203ENST00000475540 TYW5A2RUC4 315 aaKnown RBP6.68□□□□□ -1.34
SMC5-203ENST00000475540 GUCY1B2O75343 617 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 PAPSS2O95340 614 aaPredicted RBP6.68□□□□□ -1.34
SMC5-203ENST00000475540 PLA2G2AP14555 144 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 DCTDP32321 178 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 PGM1P36871 562 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 GPD2P43304 727 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 BLKP51451 505 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 ADORA2A-AS1P86434 159 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.68□□□□□ -1.34
SMC5-203ENST00000475540 FAM27E3Q08E93 113 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 PLCB4Q15147 1175 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 SHBQ15464 509 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 KLHL22Q53GT1 634 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 PRAMEF19Q5SWL8 479 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 FJX1Q86VR8 437 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 DENND6AQ8IWF6 608 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 HERVK_113Q902F9 699 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 PSMD1Q99460 953 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 MSTO1Q9BUK6 570 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 KRTAP1-5Q9BYS1 174 aa6.68□□□□□ -1.34
SMC5-203ENST00000475540 IGHV4-28A0A0C4DH34 117 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 A0A1B0GVM2 712 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.67□□□□□ -1.34
SMC5-203ENST00000475540 CLEC18AA5D8T8 446 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 TFPIP10646 304 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 MYF6P23409 242 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 TTKP33981 857 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 YWHAZP63104 245 aaKnown RBP6.67□□□□□ -1.34
SMC5-203ENST00000475540 ST3GAL1Q11201 340 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 HLFQ16534 295 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 ZNF324BQ6AW86 544 aaPredicted RBP6.67□□□□□ -1.34
SMC5-203ENST00000475540 CYP26C1Q6V0L0 522 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 MON1AQ86VX9 555 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 LURAP1LQ8IV03 231 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 CPOQ8IVL8 374 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 CLIP4Q8N3C7 705 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 CLEC18CQ8NCF0 446 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 LSM14AQ8ND56 463 aaKnown RBP6.67□□□□□ -1.34
SMC5-203ENST00000475540 GPT2Q8TD30 523 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 MORC4Q8TE76 937 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 RUFY2Q8WXA3 655 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 UBXN10Q96LJ8 280 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 SLCO5A1Q9H2Y9 848 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 CD93Q9NPY3 652 aa6.67□□□□□ -1.34
SMC5-203ENST00000475540 CNOT7Q9UIV1 285 aaKnown RBP6.67□□□□□ -1.34
SMC5-203ENST00000475540 ACOT8O14734 319 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 KCNJ13O60928 360 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 SERPINI2O75830 405 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 ZNF8P17098 575 aaPredicted RBP6.66□□□□□ -1.34
SMC5-203ENST00000475540 NFATC4Q14934 902 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 NFIL3Q16649 462 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 NADSYN1Q6IA69 706 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 LRRC8DQ7L1W4 858 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 LRRTM4Q86VH4 590 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 CERS3Q8IU89 383 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 TNIP2Q8NFZ5 429 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 FAM216AQ8WUB2 273 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 OTULINQ96BN8 352 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 MAELQ96JY0 434 aaKnown RBP6.66□□□□□ -1.34
SMC5-203ENST00000475540 EYA3Q99504 573 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 SLC25A33Q9BSK2 321 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 TMEM51Q9NW97 253 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 ANKRD10Q9NXR5 420 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 IL1RAPL1Q9NZN1 696 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 PAM16Q9Y3D7 125 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 LRP12Q9Y561 859 aa6.66□□□□□ -1.34
SMC5-203ENST00000475540 EBAG9O00559 213 aa6.65□□□□□ -1.34
SMC5-203ENST00000475540 TPD52L2O43399 206 aaKnown RBP6.65□□□□□ -1.34
SMC5-203ENST00000475540 EIF3JO75822 258 aaKnown RBP6.65□□□□□ -1.34
SMC5-203ENST00000475540 PSMC2P35998 433 aaKnown RBP6.65□□□□□ -1.34
SMC5-203ENST00000475540 CCR5P51681 352 aa6.65□□□□□ -1.34
SMC5-203ENST00000475540 CYP4A11Q02928 519 aa6.65□□□□□ -1.34
SMC5-203ENST00000475540 RUNX2Q13950 521 aa6.65□□□□□ -1.34
SMC5-203ENST00000475540 KEAP1Q14145 624 aa6.65□□□□□ -1.34
SMC5-203ENST00000475540 CTTNQ14247 550 aaKnown RBP6.65□□□□□ -1.34
SMC5-203ENST00000475540 EFHC1Q5JVL4 640 aa6.65□□□□□ -1.34
SMC5-203ENST00000475540 CAPRIN2Q6IMN6 1127 aaKnown RBP6.65□□□□□ -1.34
SMC5-203ENST00000475540 TYW3Q6IPR3 259 aaKnown RBP6.65□□□□□ -1.34
SMC5-203ENST00000475540 RETSATQ6NUM9 610 aa6.65□□□□□ -1.34
SMC5-203ENST00000475540 C17orf99Q6UX52 265 aa6.65□□□□□ -1.34
SMC5-203ENST00000475540 MOB3CQ70IA8 216 aa6.65□□□□□ -1.34
SMC5-203ENST00000475540 MB21D2Q8IYB1 491 aaPredicted RBP6.65□□□□□ -1.34
SMC5-203ENST00000475540 CPXCR1Q8N123 301 aa6.65□□□□□ -1.34
SMC5-203ENST00000475540 PHF7Q9BWX1 381 aaPredicted RBP6.65□□□□□ -1.34
SMC5-203ENST00000475540 BABAM1Q9NWV8 329 aa6.65□□□□□ -1.34
SMC5-203ENST00000475540 LUZP4Q9P127 313 aa6.65□□□□□ -1.34
SMC5-203ENST00000475540 ADGRF5Q8IZF2 1346 aa6.65□□□□□ -1.35
SMC5-203ENST00000475540 GOLGA6L10A0A0M3HER8 536 aa6.64□□□□□ -1.35
SMC5-203ENST00000475540 PABPN1LA6NDY0 278 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms