RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 PARP15Q460N3 678 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 TMEM259Q4ZIN3 620 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 INO80DQ53TQ3 878 aaPredicted RBP12.44□□□□□ -0.42
SSR1-205ENST00000475213 ZNF805Q5CZA5 627 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 ATXN7L2Q5T6C5 722 aaPredicted RBP12.44□□□□□ -0.42
SSR1-205ENST00000475213 ERMARDQ5T6L9 678 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 HGSNATQ68CP4 663 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 KIAA1161Q6NSJ0 714 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 UMODL1-AS1Q8N2C9 162 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 KDF1Q8NAX2 398 aaPredicted RBP12.44□□□□□ -0.42
SSR1-205ENST00000475213 NETO2Q8NC67 525 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 ZNF653Q96CK0 615 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 KLHDC7BQ96G42 594 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 LRIG1Q96JA1 1093 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 SNRNP25Q9BV90 132 aaKnown RBP12.44□□□□□ -0.42
SSR1-205ENST00000475213 ISCUQ9H1K1 167 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 DHX35Q9H5Z1 703 aaKnown RBP12.44□□□□□ -0.42
SSR1-205ENST00000475213 FTSJ1Q9UET6 329 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 PCSK1NQ9UHG2 260 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 FADS3Q9Y5Q0 445 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 CFAP47Q6ZTR5 3102 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 LRRK1Q38SD2 2015 aa12.44□□□□□ -0.42
SSR1-205ENST00000475213 GOLGA6L19H0YKK7 550 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 EEF2KO00418 725 aaKnown RBP12.43□□□□□ -0.42
SSR1-205ENST00000475213 RNF8O76064 485 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 UGT2B4P06133 528 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 THEGLP0DJG4 465 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 MYBL1P10243 752 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 MIPP30301 263 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 ABL2P42684 1182 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 RPS21P63220 83 aaKnown RBP12.43□□□□□ -0.42
SSR1-205ENST00000475213 FGL2Q14314 439 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 ZSCAN23Q3MJ62 389 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 TDRD12Q587J7 1177 aaKnown RBP12.43□□□□□ -0.42
SSR1-205ENST00000475213 ADGRD1Q6QNK2 874 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 GCNT7Q6ZNI0 430 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 CYP4V2Q6ZWL3 525 aaPredicted RBP12.43□□□□□ -0.42
SSR1-205ENST00000475213 CASKIN2Q8WXE0 1202 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 SYN2Q92777 582 aaPredicted RBP12.43□□□□□ -0.42
SSR1-205ENST00000475213 TRIM11Q96F44 468 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 FEM1CQ96JP0 617 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 GDAP1L1Q96MZ0 367 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 KLHL32Q96NJ5 620 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 KCTD15Q96SI1 283 aaPredicted RBP12.43□□□□□ -0.42
SSR1-205ENST00000475213 OSBPL1AQ9BXW6 950 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 SLC17A9Q9BYT1 436 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 LRRC19Q9H756 370 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 MYO1AQ9UBC5 1043 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 SCINQ9Y6U3 715 aa12.43□□□□□ -0.42
SSR1-205ENST00000475213 TMEM8BA6NDV4 472 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 EIF3CLB5ME19 914 aaKnown RBP12.42□□□□□ -0.42
SSR1-205ENST00000475213 PRPSAP2O60256 369 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 LRCH4O75427 683 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 LDOC1O95751 146 aaPredicted RBP12.42□□□□□ -0.42
SSR1-205ENST00000475213 IGSF6O95976 241 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 PAK4O96013 591 aaPredicted RBP12.42□□□□□ -0.42
SSR1-205ENST00000475213 PTMSP20962 102 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 NDST2P52849 883 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 CLDN2P57739 230 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 RHOAP61586 193 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 ZBED6P86452 979 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 RAD51Q06609 339 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 CAMK2BQ13554 666 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 CYTH1Q15438 398 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 GDPD4Q6W3E5 623 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 KANSL1Q7Z3B3 1105 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 ABI3BPQ7Z7G0 1075 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 EID2Q8N6I1 236 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 OR13H1Q8NG92 308 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 CPLX3Q8WVH0 158 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 RAB7BQ96AH8 199 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 CELF6Q96J87 481 aaKnown RBP12.42□□□□□ -0.42
SSR1-205ENST00000475213 CNDP2Q96KP4 475 aaKnown RBP12.42□□□□□ -0.42
SSR1-205ENST00000475213 EIF3CQ99613 913 aaKnown RBP12.42□□□□□ -0.42
SSR1-205ENST00000475213 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.42□□□□□ -0.42
SSR1-205ENST00000475213 PDFQ9HBH1 243 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 MRPL47Q9HD33 250 aaKnown RBP12.42□□□□□ -0.42
SSR1-205ENST00000475213 DONSONQ9NYP3 566 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 UBA2Q9UBT2 640 aaPredicted RBP12.42□□□□□ -0.42
SSR1-205ENST00000475213 GGT7Q9UJ14 662 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 ZMIZ1Q9ULJ6 1067 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 CAPN11Q9UMQ6 739 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 ITM2BQ9Y287 266 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 MFHAS1Q9Y4C4 1052 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 HS3ST3A1Q9Y663 406 aa12.42□□□□□ -0.42
SSR1-205ENST00000475213 BZW2Q9Y6E2 419 aaKnown RBP12.42□□□□□ -0.42
SSR1-205ENST00000475213 IGLON5A6NGN9 336 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 J3KR12 359 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 ENC1O14682 589 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 RAD51BO15315 384 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 INSIG1O15503 277 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 SPINT1O43278 529 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 DAPK3O43293 454 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 TSPAN6O43657 245 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 PRAMEF11O60813 436 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 SERPING1P05155 500 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 PAPOLAP51003 745 aaKnown RBP12.41□□□□□ -0.42
SSR1-205ENST00000475213 CCDC157Q569K6 752 aa12.41□□□□□ -0.42
SSR1-205ENST00000475213 PPP6R3Q5H9R7 873 aaPredicted RBP12.41□□□□□ -0.42
SSR1-205ENST00000475213 CCNI2Q6ZMN8 369 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms