RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 DUSP4Q13115 394 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 TRIP10Q15642 601 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 CBWD6Q4V339 395 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 CARD16Q5EG05 197 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 KIAA1161Q6NSJ0 714 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 C16orf62Q7Z3J2 963 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 RD3Q7Z3Z2 195 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 HORMAD1Q86X24 394 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 IFNLR1Q8IU57 520 aaPredicted RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 CHCHD4Q8N4Q1 142 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 NOA1Q8NC60 698 aaKnown RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 GPR156Q8NFN8 814 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 STYXQ8WUJ0 223 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 TRAPPC12Q8WVT3 735 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 POF1BQ8WVV4 589 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 RMND5BQ96G75 393 aaPredicted RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 IGSF21Q96ID5 467 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 CHAMP1Q96JM3 812 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 CEP19Q96LK0 163 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 MCOLN1Q9GZU1 580 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ADNPQ9H2P0 1102 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ASB8Q9H765 288 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 COPS7AQ9UBW8 275 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 HEMK1Q9Y5R4 338 aaPredicted RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ALS2Q96Q42 1657 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 GNG14A0A1W2PPG7 69 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 FAM221BA6H8Z2 402 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 NRP1O14786 923 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 MDM4O15151 490 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 TSPAN6O43657 245 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 OR10H2O60403 315 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ITGAVP06756 1048 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 C8GP07360 202 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 COL6A2P12110 1019 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 LRPAP1P30533 357 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 RFC1P35251 1148 aaPredicted RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 IGFALSP35858 605 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ASMTP46597 345 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 SERPINB10P48595 397 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 FBXW10Q5XX13 1052 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 VITQ6UXI7 678 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 RSPO2Q6UXX9 243 aaPredicted RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 JAMLQ86YT9 394 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 RNF135Q8IUD6 432 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 SYNPOQ8N3V7 929 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 OR14C36Q8NHC7 312 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 DNAJB8Q8NHS0 232 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 RP9Q8TA86 221 aaKnown RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 SLC30A5Q8TAD4 765 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 DIS3LQ8TF46 1054 aaKnown RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ADI1Q9BV57 179 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 DUSP23Q9BVJ7 150 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ISCUQ9H1K1 167 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 RMI1Q9H9A7 625 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ITM2CQ9NQX7 267 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 TDP1Q9NUW8 608 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ATP6V1HQ9UI12 483 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ZFP69BQ9UJL9 534 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 NDRG2Q9UN36 371 aaKnown RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 SCAF8Q9UPN6 1271 aaKnown RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 SCML2Q9UQR0 700 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 RUVBL1Q9Y265 456 aaKnown RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ZNF780BQ9Y6R6 833 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 IRGMA1A4Y4 181 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 FAM220BPB1ANY3 271 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 H0Y3Z8 333 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 AGPSO00116 658 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 CD3EAPO15446 510 aaKnown RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 TLX3O43711 291 aaPredicted RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 CILPO75339 1184 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 AKAP3O75969 853 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 AP2A2O94973 939 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 FESP07332 822 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 SLC35G6P0C7Q6 338 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 HAPLN1P10915 354 aaPredicted RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 GLULP15104 373 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 OAS2P29728 719 aaKnown RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 GJA8P48165 433 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 PSMD8P48556 350 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 PLK1P53350 603 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 OTUD4Q01804 1114 aaKnown RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 PPIDQ08752 370 aaKnown RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ACSM2AQ08AH3 577 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 C2orf54Q08AI8 447 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 LMAN2Q12907 356 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 BIKQ13323 160 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 CSHL1Q14406 222 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ITIH4Q14624 930 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ZBTB41Q5SVQ8 909 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 ACSM2BQ68CK6 577 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 CDCA2Q69YH5 1023 aaPredicted RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 RBM23Q86U06 439 aaKnown RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 KBTBD2Q8IY47 623 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 RAVER1Q8IY67 606 aaKnown RBP4.66□□□□□ -1.66
CCNL1-215ENST00000474539 SHC3Q92529 594 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 BAP1Q92560 729 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 SMARCD2Q92925 531 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 SLC35C1Q96A29 364 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 RAD51AP1Q96B01 352 aa4.66□□□□□ -1.66
CCNL1-215ENST00000474539 MCRS1Q96EZ8 462 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms