RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 RALYQ9UKM9 306 aaKnown RBP18.85■□□□□ 0.61
COL7A1-209ENST00000474432 HS3ST3A1Q9Y663 406 aa18.85■□□□□ 0.61
COL7A1-209ENST00000474432 FAM208BQ5VWN6 2430 aa18.85■□□□□ 0.61
COL7A1-209ENST00000474432 LRRK1Q38SD2 2015 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 MYLKQ15746 1914 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 ZSCAN5CA6NGD5 496 aaPredicted RBP18.84■□□□□ 0.61
COL7A1-209ENST00000474432 INSIG1O15503 277 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 FTLP02792 175 aaPredicted RBP18.84■□□□□ 0.61
COL7A1-209ENST00000474432 UGT2B4P06133 528 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 SKILP12757 684 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 PBX1P40424 430 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 PROX2Q3B8N5 592 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 PARP15Q460N3 678 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 FILIP1LQ4L180 1135 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 TPRG1LQ5T0D9 272 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 RYBPQ8N488 228 aaPredicted RBP18.84■□□□□ 0.61
COL7A1-209ENST00000474432 MDM1Q8TC05 714 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 RAB7BQ96AH8 199 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 FEM1CQ96JP0 617 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 KLHL32Q96NJ5 620 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 SNRNP25Q9BV90 132 aaKnown RBP18.84■□□□□ 0.61
COL7A1-209ENST00000474432 EDEM3Q9BZQ6 932 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 MFHAS1Q9Y4C4 1052 aa18.84■□□□□ 0.61
COL7A1-209ENST00000474432 IGLON5A6NGN9 336 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 FGF10O15520 208 aaPredicted RBP18.83■□□□□ 0.6
COL7A1-209ENST00000474432 TSPAN6O43657 245 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 ITIH2P19823 946 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 DGKAP23743 735 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 PSMA2P25787 234 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 MAPK8IP2Q13387 824 aaPredicted RBP18.83■□□□□ 0.6
COL7A1-209ENST00000474432 FIGNQ5HY92 759 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 HGSNATQ68CP4 663 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 PPP1R2P3Q6NXS1 205 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 GDPD4Q6W3E5 623 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 Q6ZSR6 202 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 GALNT15Q8N3T1 639 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 CASKIN2Q8WXE0 1202 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 ASB12Q8WXK4 309 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 LENG8Q96PV6 779 aaPredicted RBP18.83■□□□□ 0.6
COL7A1-209ENST00000474432 KCTD15Q96SI1 283 aaPredicted RBP18.83■□□□□ 0.6
COL7A1-209ENST00000474432 CALN1Q9BXU9 219 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 CATSPERBQ9H7T0 1116 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 CBX8Q9HC52 389 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 AP4E1Q9UPM8 1137 aa18.83■□□□□ 0.6
COL7A1-209ENST00000474432 TRABD2BA6NFA1 517 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 J3KR12 359 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 SIGLEC6O43699 453 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 C1SP09871 688 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 TIMP2P16035 220 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 MIPP30301 263 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 HTR7P34969 479 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 KLHL30Q0D2K2 578 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 FZD2Q14332 565 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 LRRC73Q5JTD7 316 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 AFMIDQ63HM1 303 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 KYAT3Q6YP21 454 aaKnown RBP18.82■□□□□ 0.6
COL7A1-209ENST00000474432 LUZP1Q86V48 1076 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 ARHGAP12Q8IWW6 846 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 FNIP1Q8TF40 1166 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 GDAP1L1Q96MZ0 367 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 OSBPL1AQ9BXW6 950 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 SLC39A8Q9C0K1 460 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 ISCUQ9H1K1 167 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 DHX35Q9H5Z1 703 aaKnown RBP18.82■□□□□ 0.6
COL7A1-209ENST00000474432 CNOT8Q9UFF9 292 aaKnown RBP18.82■□□□□ 0.6
COL7A1-209ENST00000474432 PCSK1NQ9UHG2 260 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 CELSR3Q9NYQ7 3312 aa18.82■□□□□ 0.6
COL7A1-209ENST00000474432 LAMA5O15230 3695 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 SYCE3A1L190 88 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 A6NNZ2 444 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 LRCH4O75427 683 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 RFPL3O75679 317 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 PIAS2O75928 621 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 CKMT2P17540 419 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 NDST2P52849 883 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 TPI1P60174 286 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 RHOAP61586 193 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 ZNF211Q13398 564 aaPredicted RBP18.81■□□□□ 0.6
COL7A1-209ENST00000474432 KLHL40Q2TBA0 621 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 ZNF542PQ5EBM4 170 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 ERMARDQ5T6L9 678 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 TMPRSS12Q86WS5 348 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 FAM174AQ8TBP5 190 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 CENPTQ96BT3 561 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 IFT43Q96FT9 208 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 CELF6Q96J87 481 aaKnown RBP18.81■□□□□ 0.6
COL7A1-209ENST00000474432 EXOC2Q96KP1 924 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 CPEB1Q9BZB8 566 aaKnown RBP18.81■□□□□ 0.6
COL7A1-209ENST00000474432 CCDC86Q9H6F5 360 aaKnown RBP18.81■□□□□ 0.6
COL7A1-209ENST00000474432 DKK3Q9UBP4 350 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 DKK4Q9UBT3 224 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 KLF15Q9UIH9 416 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 ITPR1Q14643 2758 aa18.81■□□□□ 0.6
COL7A1-209ENST00000474432 ANKRD36A6QL64 1941 aa18.8■□□□□ 0.6
COL7A1-209ENST00000474432 SPTY2D1-AS1A0A0U1RR47 76 aa18.8■□□□□ 0.6
COL7A1-209ENST00000474432 PRAMEF11O60813 436 aa18.8■□□□□ 0.6
COL7A1-209ENST00000474432 IGSF6O95976 241 aa18.8■□□□□ 0.6
COL7A1-209ENST00000474432 TCF4P15884 667 aa18.8■□□□□ 0.6
COL7A1-209ENST00000474432 ACP1P24666 158 aa18.8■□□□□ 0.6
COL7A1-209ENST00000474432 RGRP47804 291 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms