RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 DENND6BQ8NEG7 585 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 GLMNQ92990 594 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 PPP1R16AQ96I34 528 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 TBATAQ96M53 351 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 KREMEN1Q96MU8 473 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 LENG8Q96PV6 779 aaPredicted RBP5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 SLC2A13Q96QE2 648 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 MED15Q96RN5 788 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 IL12RB2Q99665 862 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 SEMA3CQ99985 751 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 LRRC61Q9BV99 259 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 CLPBQ9H078 707 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 TNKS2Q9H2K2 1166 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 GOLPH3LQ9H4A5 285 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 SYNDIG1Q9H7V2 258 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 METTL14Q9HCE5 456 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 COX16Q9P0S2 106 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 APOBEC3BQ9UH17 382 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 IL36AQ9UHA7 158 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 PNMA8BQ9ULN7 279 aaPredicted RBP5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 CNTN6Q9UQ52 1028 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 HS3ST4Q9Y661 456 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 ANKRD17O75179 2603 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 ABCA12Q86UK0 2595 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 TRIM49BA6NDI0 452 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 IGLON5A6NGN9 336 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 I6L893 689 aaPredicted RBP5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 FPGTO14772 594 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 NVLO15381 856 aaKnown RBP5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 YY2O15391 372 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 P4HA2O15460 535 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 HSF2BPO75031 334 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 PAGE1O75459 146 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 GRAP2O75791 330 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 ENDOD1O94919 500 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 LETM1O95202 739 aaPredicted RBP5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 CELA2BP08218 269 aaPredicted RBP5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 LIPCP11150 499 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 KRT5P13647 590 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 HGFP14210 728 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 TSHRP16473 764 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 WT1P19544 449 aaPredicted RBP5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 L1CAMP32004 1257 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 UGT1A5P35504 534 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 IGFALSP35858 605 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 ABL2P42684 1182 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 RECQLP46063 649 aaPredicted RBP5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 CCR10P46092 362 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 SERPINH1P50454 418 aaKnown RBP5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 ADKP55263 362 aaKnown RBP5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 RIPPLY3P57055 190 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 GUCA2AQ02747 115 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 TLE1Q04724 770 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 LRRC63Q05C16 580 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 MTA1Q13330 715 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 PNOCQ13519 176 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 C1orf61Q13536 156 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 TBR1Q16650 682 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 ARTNQ5T4W7 220 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 LCE2AQ5TA79 106 aaPredicted RBP5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 OTUD1Q5VV17 481 aaPredicted RBP5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 ANKRD40Q6AI12 368 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 RAB11FIP2Q7L804 512 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 TFAP2DQ7Z6R9 452 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 SETD3Q86TU7 594 aaPredicted RBP5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 VASH2Q86V25 355 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 ZSCAN30Q86W11 494 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 JAMLQ86YT9 394 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 PHACTR4Q8IZ21 702 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 DEFB106AQ8N104 65 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 PCDH20Q8N6Y1 951 aaKnown RBP5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 KYQ8NBH2 561 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 BTN2A2Q8WVV5 523 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 HTR3CQ8WXA8 447 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 ZNF606Q8WXB4 792 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 ASB12Q8WXK4 309 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 VOPP1Q96AW1 172 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 FEM1CQ96JP0 617 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 PPP1R13BQ96KQ4 1090 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 SPATA32Q96LK8 384 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 CPXM1Q96SM3 734 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 TSG101Q99816 390 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 ARHGAP9Q9BRR9 750 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 C1QTNF2Q9BXJ5 285 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 SRRTQ9BXP5 876 aaKnown RBP5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 FOXP3Q9BZS1 431 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 CEP44Q9C0F1 390 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 SIK2Q9H0K1 926 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 EPB41L5Q9HCM4 733 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 ACP6Q9NPH0 428 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 ANLNQ9NQW6 1124 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 ASNSD1Q9NWL6 643 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 SPASTQ9UBP0 616 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 IPO11Q9UI26 975 aaKnown RBP5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 GGT7Q9UJ14 662 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 PADI4Q9UM07 663 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 ITM2BQ9Y287 266 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 SCN8AQ9UQD0 1980 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 CREBBPQ92793 2442 aa5.22□□□□□ -1.57
SNRNP40-204ENST00000474025 IGLV3-10A0A075B6K4 115 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms