RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 C16orf96A6NNT2 1141 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 PPP1R12AO14974 1030 aaPredicted RBP13.93□□□□□ -0.18
USF1-205ENST00000473969 BCAT2O15382 392 aaPredicted RBP13.93□□□□□ -0.18
USF1-205ENST00000473969 PLRG1O43660 514 aaKnown RBP13.93□□□□□ -0.18
USF1-205ENST00000473969 MAP3K6O95382 1288 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 CD27P26842 260 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 SERPINA4P29622 427 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 CTNNA1P35221 906 aaKnown RBP13.93□□□□□ -0.18
USF1-205ENST00000473969 NUDT1P36639 197 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 MMP13P45452 471 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 CCR5P51681 352 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 RWDD2BP57060 319 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 ARHGAP8P85298 464 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 GBE1Q04446 702 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 BCL2L1Q07817 233 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 HNRNPDQ14103 355 aaKnown RBP13.93□□□□□ -0.18
USF1-205ENST00000473969 PDK1Q15118 436 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 SF3A2Q15428 464 aaKnown RBP13.93□□□□□ -0.18
USF1-205ENST00000473969 TEAD4Q15561 434 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 CCDC181Q5TID7 509 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 AGBL4Q5VU57 503 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 SLC9A4Q6AI14 798 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 NEK5Q6P3R8 708 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 ADAT2Q7Z6V5 191 aaKnown RBP13.93□□□□□ -0.18
USF1-205ENST00000473969 TTC7BQ86TV6 843 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 RAB7BQ96AH8 199 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 SKA1Q96BD8 255 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 BIRC7Q96CA5 298 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 ZNF641Q96N77 438 aaPredicted RBP13.93□□□□□ -0.18
USF1-205ENST00000473969 PSKH2Q96QS6 385 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 TUBGCP5Q96RT8 1024 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 SMOC1Q9H4F8 434 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 SUV39H2Q9H5I1 410 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 SCUBE2Q9NQ36 999 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 TMEM74BQ9NUR3 256 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 TRIM10Q9UDY6 481 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 SLC6A14Q9UN76 642 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 ABCA7Q8IZY2 2146 aa13.93□□□□□ -0.18
USF1-205ENST00000473969 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.92□□□□□ -0.18
USF1-205ENST00000473969 GRID2IPA4D2P6 1211 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 MIF4GDA9UHW6 222 aaKnown RBP13.92□□□□□ -0.18
USF1-205ENST00000473969 MATN3O15232 486 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 CST8O60676 142 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 SYPP08247 313 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 SERPINF2P08697 491 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 ADRB3P13945 408 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 SDHBP21912 280 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 CTNNA2P26232 953 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 CDKN2BP42772 138 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 NR2C2P49116 596 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 COPS2P61201 443 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 AP1S1P61966 158 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 SLC10A7Q0GE19 358 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 PIP5KL1Q5T9C9 394 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 PARS2Q7L3T8 475 aaKnown RBP13.92□□□□□ -0.18
USF1-205ENST00000473969 CCDC13Q8IYE1 715 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 ZCCHC9Q8N567 271 aaKnown RBP13.92□□□□□ -0.18
USF1-205ENST00000473969 PLD5Q8N7P1 536 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 HCAR2Q8TDS4 363 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 UBE2Q2Q8WVN8 375 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 P3H4Q92791 437 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 HDAC11Q96DB2 347 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 FEM1CQ96JP0 617 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 TSGA13Q96PP4 275 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 BRD8Q9H0E9 1235 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 NT5MQ9NPB1 228 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 DTLQ9NZJ0 730 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.92□□□□□ -0.18
USF1-205ENST00000473969 SDK1Q7Z5N4 2213 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 PLXND1Q9Y4D7 1925 aa13.92□□□□□ -0.18
USF1-205ENST00000473969 SPAG17Q6Q759 2223 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 A0A1W2PPC4 97 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 INSIG1O15503 277 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 RNGTTO60942 597 aaKnown RBP13.91□□□□□ -0.18
USF1-205ENST00000473969 PIGNO95427 931 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 KRT10P13645 584 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 CCNB1P14635 433 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 TGM2P21980 687 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 NFKBIAP25963 317 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 MAT2AP31153 395 aaKnown RBP13.91□□□□□ -0.18
USF1-205ENST00000473969 SUOXP51687 545 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 AFF3P51826 1226 aaKnown RBP13.91□□□□□ -0.18
USF1-205ENST00000473969 POLR2LP62875 67 aaKnown RBP13.91□□□□□ -0.18
USF1-205ENST00000473969 AP1B1Q10567 949 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 LLGL1Q15334 1064 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 PPP2R5EQ16537 467 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 SETMARQ53H47 684 aaPredicted RBP13.91□□□□□ -0.18
USF1-205ENST00000473969 SLC45A4Q5BKX6 768 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 RALGPS1Q5JS13 557 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 PEAR1Q5VY43 1037 aaPredicted RBP13.91□□□□□ -0.18
USF1-205ENST00000473969 ERAP2Q6P179 960 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 SLC23A3Q6PIS1 610 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 BRAT1Q6PJG6 821 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 ZSCAN30Q86W11 494 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 TRIM69Q86WT6 500 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 LRRC57Q8N9N7 239 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 KRT35Q92764 455 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 FAM131CQ96AQ9 280 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 ALS2CR12Q96Q35 445 aa13.91□□□□□ -0.18
USF1-205ENST00000473969 POLR1EQ9GZS1 481 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms