RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 PRR23AA6NEV1 266 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 MEI4A8MW99 385 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 TBC1D3LB9A6J9 549 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 KCNK1O00180 336 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 RNF103O00237 685 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 KCNK3O14649 394 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 MUSKO15146 869 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 INSIG1O15503 277 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 SLC7A4O43246 635 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 KIF5CO60282 957 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 TBC1D3HP0C7X1 549 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 ITGB7P26010 798 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 MSNP26038 577 aaKnown RBP12.57□□□□□ -0.4
DDX56-209ENST00000473924 SERPINA4P29622 427 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 RGRP47804 291 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 CSNK1DP48730 415 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 NEK3P51956 506 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 MAXP61244 160 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 AP1S1P61966 158 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 CREB5Q02930 508 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 ZNF33AQ06730 810 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 BCL2L1Q07817 233 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 ZNF805Q5CZA5 627 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 ZNF569Q5MCW4 686 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 SYCP2LQ5T4T6 812 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 LYSMD4Q5XG99 296 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 TBC1D3GQ6DHY5 549 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 TBC1D3CQ6IPX1 549 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 B4GALNT4Q76KP1 1039 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 ERN2Q76MJ5 926 aaKnown RBP12.57□□□□□ -0.4
DDX56-209ENST00000473924 RGL4Q8IZJ4 473 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 TBC1D3Q8IZP1 549 aaPredicted RBP12.57□□□□□ -0.4
DDX56-209ENST00000473924 TEX26Q8N6G2 289 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 CADM4Q8NFZ8 388 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 MAML1Q92585 1016 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 FATE1Q969F0 183 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 ARRDC3Q96B67 414 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 LOXL4Q96JB6 756 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 HSPA12BQ96MM6 686 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 TUBGCP5Q96RT8 1024 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 MGME1Q9BQP7 344 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 POLR1EQ9GZS1 481 aaKnown RBP12.57□□□□□ -0.4
DDX56-209ENST00000473924 AMACRQ9UHK6 382 aa12.57□□□□□ -0.4
DDX56-209ENST00000473924 THADAQ6YHU6 1953 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.56□□□□□ -0.4
DDX56-209ENST00000473924 TTC24A2A3L6 582 aaPredicted RBP12.56□□□□□ -0.4
DDX56-209ENST00000473924 C16orf96A6NNT2 1141 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 H7C0C1 242 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 FSBPO95073 299 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 PIGNO95427 931 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 JCHAINP01591 159 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 RETP07949 1114 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 XPAP23025 273 aaPredicted RBP12.56□□□□□ -0.4
DDX56-209ENST00000473924 PTGER3P43115 390 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 ATP5OP48047 213 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 ADPRHP54922 357 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 OTUD4Q01804 1114 aaKnown RBP12.56□□□□□ -0.4
DDX56-209ENST00000473924 AGBL4Q5VU57 503 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 DCAF12L1Q5VU92 463 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 NCEH1Q6PIU2 408 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 PARS2Q7L3T8 475 aaKnown RBP12.56□□□□□ -0.4
DDX56-209ENST00000473924 CYP2U1Q7Z449 544 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 CAMK1DQ8IU85 385 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 PGBD5Q8N414 524 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.56□□□□□ -0.4
DDX56-209ENST00000473924 OR2T34Q8NGX1 318 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 ACTL9Q8TC94 416 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 SNX19Q92543 992 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 ZNF641Q96N77 438 aaPredicted RBP12.56□□□□□ -0.4
DDX56-209ENST00000473924 NUDCD1Q96RS6 583 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 FERMT1Q9BQL6 677 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 HERPUD2Q9BSE4 406 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 HDAC8Q9BY41 377 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 PCED1AQ9H1Q7 454 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 SUV39H2Q9H5I1 410 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 C6orf106Q9H6K1 298 aaPredicted RBP12.56□□□□□ -0.4
DDX56-209ENST00000473924 PYCARDQ9ULZ3 195 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 JRKLQ9Y4A0 524 aa12.56□□□□□ -0.4
DDX56-209ENST00000473924 ABCA7Q8IZY2 2146 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 METTL12A8MUP2 240 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 HACD1B0YJ81 288 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 NEMP1O14524 444 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 MTSS1O43312 755 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 PLRG1O43660 514 aaKnown RBP12.55□□□□□ -0.4
DDX56-209ENST00000473924 GJB3O75712 270 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 EPN2O95208 641 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 ADRB3P13945 408 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 CES1P23141 567 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 PLA2G5P39877 138 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 EIF3EP60228 445 aaKnown RBP12.55□□□□□ -0.4
DDX56-209ENST00000473924 IFI35P80217 286 aaPredicted RBP12.55□□□□□ -0.4
DDX56-209ENST00000473924 XRCC4Q13426 336 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 PRKD1Q15139 912 aaPredicted RBP12.55□□□□□ -0.4
DDX56-209ENST00000473924 NOMO1Q15155 1222 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 RALGPS1Q5JS13 557 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 WDR45BQ5MNZ6 344 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 PIP5KL1Q5T9C9 394 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 KIAA0895LQ68EN5 471 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 ASCL5Q7RTU5 278 aa12.55□□□□□ -0.4
DDX56-209ENST00000473924 TTC7BQ86TV6 843 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms