RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 NUDT1P36639 197 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 HSPA9P38646 679 aaKnown RBP17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 CDKN2BP42772 138 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 RGRP47804 291 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 NEK3P51956 506 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 LIMK1P53667 647 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 GBE1Q04446 702 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 IFI16Q16666 785 aaKnown RBP17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 KIAA1328Q86T90 577 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 SRLQ86TD4 932 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 ATPAF2Q8N5M1 289 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 CCDC112Q8NEF3 446 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 KIAA1524Q8TCG1 905 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 MAML1Q92585 1016 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 ZNF641Q96N77 438 aaPredicted RBP17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 KLHL32Q96NJ5 620 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 TUBGCP5Q96RT8 1024 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 DESI2Q9BSY9 194 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 CINPQ9BW66 212 aaPredicted RBP17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 NUSAP1Q9BXS6 441 aaKnown RBP17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 MAK16Q9BXY0 300 aaKnown RBP17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 SUV39H2Q9H5I1 410 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 DTLQ9NZJ0 730 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 FADS3Q9Y5Q0 445 aa17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 ATXN2Q99700 1313 aaKnown RBP17.92■□□□□ 0.46
RPUSD3-214ENST00000473522 EML5Q05BV3 1969 aa17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 LNP1A1A4G5 178 aa17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 CDX4O14627 284 aaPredicted RBP17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 KRT1P04264 644 aa17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 UGT2B4P06133 528 aa17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 CR2P20023 1033 aa17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 PEX5P50542 639 aa17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 MARC1Q5VT66 337 aa17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 FBXL19Q6PCT2 694 aa17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 PARS2Q7L3T8 475 aaKnown RBP17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 RNF10Q8N5U6 811 aaKnown RBP17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 EXD1Q8NHP7 514 aa17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 NETO1Q8TDF5 533 aa17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 EXOC2Q96KP1 924 aa17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 MIR1-1HGQ9H1L0 117 aa17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 DLL3Q9NYJ7 618 aa17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 SLCO1B1Q9Y6L6 691 aa17.91■□□□□ 0.46
RPUSD3-214ENST00000473522 A0A0U1RQJ8 604 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 TSPAN11A1L157 253 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 ARHGAP33O14559 1287 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 AREL1O15033 823 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 TNNT1P13805 278 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 TIMP2P16035 220 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 CTNNA1P35221 906 aaKnown RBP17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 MAPK8P45983 427 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 SUOXP51687 545 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 NAP1L1P55209 391 aaKnown RBP17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 PPP2CBP62714 309 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 RACK1P63244 317 aaKnown RBP17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 PPP2CAP67775 309 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 AASDHQ4L235 1098 aaPredicted RBP17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 ODF2Q5BJF6 829 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 RALGPS1Q5JS13 557 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 TIGD7Q6NT04 549 aaPredicted RBP17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 SPOCD1Q6ZMY3 1216 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 ZNF662Q6ZS27 426 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 PRPF39Q86UA1 669 aaKnown RBP17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 PGBD5Q8N414 524 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 NSMCE1Q8WV22 266 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 UBE2Q2Q8WVN8 375 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 SPOCK2Q92563 424 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 KRT35Q92764 455 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 HDAC11Q96DB2 347 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 FEM1CQ96JP0 617 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 NSMCE3Q96MG7 304 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 MGME1Q9BQP7 344 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 ZDHHC5Q9C0B5 715 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 TM9SF3Q9HD45 589 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 AMACRQ9UHK6 382 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 DMTF1Q9Y222 760 aa17.9■□□□□ 0.46
RPUSD3-214ENST00000473522 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 GRID2IPA4D2P6 1211 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 TRAFD1O14545 582 aaPredicted RBP17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 APOL1O14791 398 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 TM4SF5O14894 197 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 TSPAN6O43657 245 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 RNGTTO60942 597 aaKnown RBP17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 CFIP05156 583 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 SYPP08247 313 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 ENGP17813 658 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 CTNNA2P26232 953 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 NR2C2P49116 596 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 SCNN1BP51168 640 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 AFF3P51826 1226 aaKnown RBP17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 AP1S1P61966 158 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 TFDP2Q14188 446 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 ZNF284Q2VY69 593 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 TTC7BQ86TV6 843 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 NT5DC3Q86UY8 548 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 ZSCAN30Q86W11 494 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 HORMAD1Q86X24 394 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 BBS5Q8N3I7 341 aa17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 ZCCHC9Q8N567 271 aaKnown RBP17.89■□□□□ 0.45
RPUSD3-214ENST00000473522 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms