RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ALG3Q92685 438 aa13.31□□□□□ -0.28
TPM3-216ENST00000473036 TCEAL3Q969E4 200 aa13.31□□□□□ -0.28
TPM3-216ENST00000473036 ZNF830Q96NB3 372 aaPredicted RBP13.31□□□□□ -0.28
TPM3-216ENST00000473036 IL36AQ9UHA7 158 aa13.31□□□□□ -0.28
TPM3-216ENST00000473036 EVLQ9UI08 416 aaPredicted RBP13.31□□□□□ -0.28
TPM3-216ENST00000473036 ZMIZ1Q9ULJ6 1067 aa13.31□□□□□ -0.28
TPM3-216ENST00000473036 PACSIN2Q9UNF0 486 aaPredicted RBP13.31□□□□□ -0.28
TPM3-216ENST00000473036 ZKSCAN5Q9Y2L8 839 aa13.31□□□□□ -0.28
TPM3-216ENST00000473036 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.31□□□□□ -0.28
TPM3-216ENST00000473036 ATXN2Q99700 1313 aaKnown RBP13.31□□□□□ -0.28
TPM3-216ENST00000473036 KHNYNO15037 678 aaKnown RBP13.3□□□□□ -0.28
TPM3-216ENST00000473036 RNASEH1O60930 286 aaKnown RBP13.3□□□□□ -0.28
TPM3-216ENST00000473036 PALMO75781 387 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 IGHV4-34P06331 123 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 CTNNA1P35221 906 aaKnown RBP13.3□□□□□ -0.28
TPM3-216ENST00000473036 DPP6P42658 865 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 GEMIN4P57678 1058 aaKnown RBP13.3□□□□□ -0.28
TPM3-216ENST00000473036 CREB5Q02930 508 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 ZNF33AQ06730 810 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 BYSLQ13895 437 aaKnown RBP13.3□□□□□ -0.28
TPM3-216ENST00000473036 SLC36A4Q6YBV0 504 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 SPOCD1Q6ZMY3 1216 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 B4GALNT4Q76KP1 1039 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 LPCAT2Q7L5N7 544 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 ZSWIM9Q86XI8 627 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 VSIG1Q86XK7 387 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 MAP7D3Q8IWC1 876 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 C1orf216Q8TAB5 229 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 HSPA12BQ96MM6 686 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 HEPHQ9BQS7 1158 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 ZDHHC6Q9H6R6 413 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 SP110Q9HB58 689 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 DONSONQ9NYP3 566 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 SAE1Q9UBE0 346 aaPredicted RBP13.3□□□□□ -0.28
TPM3-216ENST00000473036 PILRBQ9UKJ0 227 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 SCML1Q9UN30 329 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 PPP2R2CQ9Y2T4 447 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 PCDHA3Q9Y5H8 950 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 WDFY3Q8IZQ1 3526 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 PCDH15Q96QU1 1955 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 LRRK1Q38SD2 2015 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 PKD1L2Q7Z442 2459 aa13.3□□□□□ -0.28
TPM3-216ENST00000473036 hCG_1818297A0A087WSY0 165 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 LNP1A1A4G5 178 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 METTL12A8MUP2 240 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 KPNA3O00505 521 aaPredicted RBP13.29□□□□□ -0.28
TPM3-216ENST00000473036 DDX3YO15523 660 aaKnown RBP13.29□□□□□ -0.28
TPM3-216ENST00000473036 PIGNO95427 931 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 SEMA4FO95754 770 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 FTCDO95954 541 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 PECAM1P16284 738 aaPredicted RBP13.29□□□□□ -0.28
TPM3-216ENST00000473036 ITIH2P19823 946 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 CR2P20023 1033 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 CTNNA2P26232 953 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 GARSP41250 739 aaKnown RBP13.29□□□□□ -0.28
TPM3-216ENST00000473036 RHOAP61586 193 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 PPP2CBP62714 309 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 PPP2CAP67775 309 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 LBRQ14739 615 aaKnown RBP13.29□□□□□ -0.28
TPM3-216ENST00000473036 TTC31Q49AM3 519 aaPredicted RBP13.29□□□□□ -0.28
TPM3-216ENST00000473036 SPDYCQ5MJ68 293 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 ZFYVE27Q5T4F4 411 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 DCAF12L1Q5VU92 463 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 NCEH1Q6PIU2 408 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 PARS2Q7L3T8 475 aaKnown RBP13.29□□□□□ -0.28
TPM3-216ENST00000473036 CADM4Q8NFZ8 388 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 KIAA1524Q8TCG1 905 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 CASKIN2Q8WXE0 1202 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 DNASE2BQ8WZ79 361 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 MAML1Q92585 1016 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 BIRC7Q96CA5 298 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 OLFM3Q96PB7 478 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 OMDQ99983 421 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 TMEM121BQ9BXQ6 578 aaPredicted RBP13.29□□□□□ -0.28
TPM3-216ENST00000473036 BTBD1Q9H0C5 482 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 SGK2Q9HBY8 427 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 TMEM9BQ9NQ34 198 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 FSCN3Q9NQT6 498 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 DDX56Q9NY93 547 aaKnown RBP13.29□□□□□ -0.28
TPM3-216ENST00000473036 FZD4Q9ULV1 537 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 TRPM6Q9BX84 2022 aa13.29□□□□□ -0.28
TPM3-216ENST00000473036 FAM47DPA6NHR8 397 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 C4orf47A7E2U8 309 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 C1QTNF9BB2RNN3 333 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 KRIT1O00522 736 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 WNT9AO14904 365 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 PLRG1O43660 514 aaKnown RBP13.28□□□□□ -0.28
TPM3-216ENST00000473036 NDUFS2O75306 463 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 PRNPP04156 253 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 UGT2B4P06133 528 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 C1QTNF9P0C862 333 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 PYGMP11217 842 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 SERPINB6P35237 376 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 ABL2P42684 1182 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 NAP1L1P55209 391 aaKnown RBP13.28□□□□□ -0.28
TPM3-216ENST00000473036 SNRPD1P62314 119 aaKnown RBP13.28□□□□□ -0.28
TPM3-216ENST00000473036 DYNLT1P63172 113 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 COL9A2Q14055 689 aaPredicted RBP13.28□□□□□ -0.28
TPM3-216ENST00000473036 LRRC73Q5JTD7 316 aa13.28□□□□□ -0.28
TPM3-216ENST00000473036 FAM46CQ5VWP2 391 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms