RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 TMCC1O94876 653 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 PENKP01210 267 aaPredicted RBP14.78□□□□□ -0.04
HIF3A-206ENST00000472815 MMP2P08253 660 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 SNRPAP09012 282 aaKnown RBP14.78□□□□□ -0.04
HIF3A-206ENST00000472815 BRAFP15056 766 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 TPH1P17752 444 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 GLDCP23378 1020 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 SCNN1BP51168 640 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 RHOAP61586 193 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 SULT2A1Q06520 285 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 POU6F1Q14863 301 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 RARS2Q5T160 578 aaKnown RBP14.78□□□□□ -0.04
HIF3A-206ENST00000472815 PDPK2PQ6A1A2 396 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 DENND5AQ6IQ26 1287 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 RASSF3Q86WH2 238 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 C12orf76Q8N812 135 aaPredicted RBP14.78□□□□□ -0.04
HIF3A-206ENST00000472815 RANBP9Q96S59 729 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 SLC2A11Q9BYW1 496 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 IGFLR1Q9H665 355 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 SSU72Q9NP77 194 aaKnown RBP14.78□□□□□ -0.04
HIF3A-206ENST00000472815 NKIRAS1Q9NYS0 192 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 PLK2Q9NYY3 685 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 SMG5Q9UPR3 1016 aaKnown RBP14.78□□□□□ -0.04
HIF3A-206ENST00000472815 TCAF1Q9Y4C2 921 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 C2orf16Q68DN1 1984 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 NEDD8-MDP1E9PL57 170 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 SNAP91O60641 907 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 ALADP13716 330 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 HOXB8P17481 243 aaPredicted RBP14.78□□□□□ -0.04
HIF3A-206ENST00000472815 MDH1P40925 334 aaKnown RBP14.78□□□□□ -0.04
HIF3A-206ENST00000472815 LMAN2Q12907 356 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 CYTH1Q15438 398 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 TERF2Q15554 542 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 PLEKHG6Q3KR16 790 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 KDELC2Q7Z4H8 507 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 GPR149Q86SP6 731 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 CYP4X1Q8N118 509 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 SLC25A41Q8N5S1 370 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 EFHBQ8N7U6 833 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 ITFG1Q8TB96 612 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 ALG14Q96F25 216 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 ADGRE3Q9BY15 652 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 TRABDQ9H4I3 376 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 PLAC1Q9HBJ0 212 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 KCNK9Q9NPC2 374 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 CHRAC1Q9NRG0 131 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 ABCB8Q9NUT2 735 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 MARK1Q9P0L2 795 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 PRKAG3Q9UGI9 489 aa14.78□□□□□ -0.04
HIF3A-206ENST00000472815 EPOPA6NHQ4 379 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 SOX1O00570 391 aaPredicted RBP14.77□□□□□ -0.05
HIF3A-206ENST00000472815 NDST3O95803 873 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 MT-ND3P03897 115 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 CR2P20023 1033 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 AP1S1P61966 158 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 DNAJC3Q13217 504 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 SEPT6Q14141 434 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 CBX2Q14781 532 aaPredicted RBP14.77□□□□□ -0.05
HIF3A-206ENST00000472815 GPR153Q6NV75 609 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 TRMT10BQ6PF06 316 aaKnown RBP14.77□□□□□ -0.05
HIF3A-206ENST00000472815 WFDC5Q8TCV5 224 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 SMARCD2Q92925 531 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 PEX13Q92968 403 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 E2F7Q96AV8 911 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 CENPTQ96BT3 561 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 ZSWIM3Q96MP5 696 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 CPNE1Q99829 537 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 NOD2Q9HC29 1040 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 INTS9Q9NV88 658 aaKnown RBP14.77□□□□□ -0.05
HIF3A-206ENST00000472815 OBP2AQ9NY56 170 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 SLC25A13Q9UJS0 675 aa14.77□□□□□ -0.05
HIF3A-206ENST00000472815 ZCWPW2A0A1B0GU75 182 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.76□□□□□ -0.05
HIF3A-206ENST00000472815 MUSKO15146 869 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 SHOX2O60902 331 aaPredicted RBP14.76□□□□□ -0.05
HIF3A-206ENST00000472815 PAPSS2O95340 614 aaPredicted RBP14.76□□□□□ -0.05
HIF3A-206ENST00000472815 ADH1CP00326 375 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 C1QAP02745 245 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 TYRP14679 529 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 SLC18A1P54219 525 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 GNGT1P63211 74 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 PITRM1Q5JRX3 1037 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 SIRPB2Q5JXA9 342 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 CES5AQ6NT32 575 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 LINGO4Q6UY18 593 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 KCNMB4Q86W47 210 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 TMEM25Q86YD3 366 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 CALML6Q8TD86 181 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 OSCP1Q8WVF1 389 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 C20orf96Q9NUD7 363 aaPredicted RBP14.76□□□□□ -0.05
HIF3A-206ENST00000472815 THG1LQ9NWX6 298 aaKnown RBP14.76□□□□□ -0.05
HIF3A-206ENST00000472815 DUS2Q9NX74 493 aaKnown RBP14.76□□□□□ -0.05
HIF3A-206ENST00000472815 LMCD1Q9NZU5 365 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 GGA2Q9UJY4 613 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 ANKRD36A6QL64 1941 aa14.76□□□□□ -0.05
HIF3A-206ENST00000472815 TMEM120BA0PK00 339 aa14.75□□□□□ -0.05
HIF3A-206ENST00000472815 FAM47DPA6NHR8 397 aa14.75□□□□□ -0.05
HIF3A-206ENST00000472815 CXorf49A8MYA2 514 aaPredicted RBP14.75□□□□□ -0.05
HIF3A-206ENST00000472815 PRPF4O43172 522 aaKnown RBP eCLIP14.75□□□□□ -0.05
HIF3A-206ENST00000472815 NFATC1O95644 943 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms