RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 KCNK9Q9NPC2 374 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 SPATS2LQ9NUQ6 558 aaKnown RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 ARL15Q9NXU5 204 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.77□□□□□ -1.97
XRN1-210ENST00000472697 IL1RAPL1Q9NZN1 696 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 EHD2Q9NZN4 543 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 MAFFQ9ULX9 164 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 RRP15Q9Y3B9 282 aaKnown RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 NR2E1Q9Y466 385 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 TRIM17Q9Y577 477 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 RPRD2Q5VT52 1461 aaKnown RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 DISP2A7MBM2 1401 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 RREB1Q92766 1687 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 A0A0B4J293 547 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 A0A1B0GTW7 788 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 B5MCH6 92 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 CDC14BO60729 498 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 TBCAO75347 108 aaKnown RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 ITGALP20701 1170 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 CTGFP29279 349 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 CAMPP49913 170 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 PPP2R2BQ00005 443 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 ECT2LQ008S8 904 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 TAP1Q03518 808 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 DMWDQ09019 674 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 BFSP1Q12934 665 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 TREML2Q5T2D2 321 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 ARMC4Q5T2S8 1044 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 ARTNQ5T4W7 220 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 MEX3CQ5U5Q3 659 aaKnown RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 LRRC55Q6ZSA7 311 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 GPAT4Q86UL3 456 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 CNTN4Q8IWV2 1026 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 MMP21Q8N119 569 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 DPP10Q8N608 796 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 ARL6IP6Q8N6S5 226 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 TMEM217Q8N7C4 229 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 KDM1BQ8NB78 822 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 ZBTB44Q8NCP5 570 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 CFAP61Q8NHU2 1237 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 MYCBPAPQ8TBZ2 947 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 PRPF31Q8WWY3 499 aaKnown RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 ARHGEF2Q92974 986 aaKnown RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 RNF31Q96EP0 1072 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 LOXL4Q96JB6 756 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 ZNF558Q96NG5 402 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 GBP5Q96PP8 586 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 CDRT15Q96T59 188 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 TUBB6Q9BUF5 446 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 FUT8Q9BYC5 575 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 WDR11Q9BZH6 1224 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 MCOLN1Q9GZU1 580 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 SLC28A3Q9HAS3 691 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 SLC22A11Q9NSA0 550 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 DDX43Q9NXZ2 648 aaKnown RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 ABI3Q9P2A4 366 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 PLEKHB1Q9UF11 243 aaPredicted RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 DTX4Q9Y2E6 619 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 ATRNO75882 1429 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 PARD3Q8TEW0 1356 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 NCOA2Q15596 1464 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 GCOM1H8Y6P7 765 aaPredicted RBP2.76□□□□□ -1.97
XRN1-210ENST00000472697 PRYO14603 147 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 TEX33O43247 280 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 B4GALT3O60512 393 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 ONECUT2O95948 504 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 ADAP00813 363 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 OR52Z1P0C646 297 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 FAM58BPP0C7Q3 252 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 ANXA7P20073 488 aaKnown RBP2.76□□□□□ -1.97
XRN1-210ENST00000472697 PTAFRP25105 342 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 PRKAR1BP31321 381 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 GNAQP50148 359 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 STAT2P52630 851 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 ARFIP1P53367 373 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 MXRA7P84157 204 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 GCNT1Q02742 428 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 MZT1Q08AG7 82 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 HYAL4Q2M3T9 481 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 PREPLQ4J6C6 727 aaPredicted RBP2.76□□□□□ -1.97
XRN1-210ENST00000472697 COLEC12Q5KU26 742 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 PLEKHS1Q5SXH7 462 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 TMEM211Q6ICI0 200 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 TMEM270Q6UE05 265 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 PRR23BQ6ZRT6 265 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 TFAP2DQ7Z6R9 452 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 NBPF11Q86T75 865 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 FAM160B2Q86V87 743 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 DNAAF5Q86Y56 855 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 SLC35F3Q8IY50 421 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 FBXO39Q8N4B4 442 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 LINC01356Q8N9X3 169 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 OR52N2Q8NGI0 321 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 MZB1Q8WU39 189 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 ST8SIA2Q92186 375 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 KAT2AQ92830 837 aa2.76□□□□□ -1.97
XRN1-210ENST00000472697 ZNF622Q969S3 477 aaKnown RBP eCLIP2.76□□□□□ -1.974e-7■■□□□ 12.6
XRN1-210ENST00000472697 LRRC59Q96AG4 307 aaKnown RBP2.76□□□□□ -1.97
XRN1-210ENST00000472697 YTHDC1Q96MU7 727 aaKnown RBP2.76□□□□□ -1.97
XRN1-210ENST00000472697 PIMREGQ9BSJ6 248 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms