RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PPP1R13BQ96KQ4 1090 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 CEP63Q96MT8 703 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 IL12RB2Q99665 862 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 BOCQ9BWV1 1114 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 MAGEB5Q9BZ81 275 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 MUC3BQ9H195 1237 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 ASNSD1Q9NWL6 643 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 GEMIN8Q9NWZ8 242 aaKnown RBP9.5□□□□□ -0.89
VCL-204ENST00000472585 ARHGEF38Q9NXL2 777 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 IL36AQ9UHA7 158 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 SALL4Q9UJQ4 1053 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 MAN1B1Q9UKM7 699 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 ITM2BQ9Y287 266 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 PCDHGA7Q9Y5G6 932 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 CSNK1G3Q9Y6M4 447 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 ANKRD17O75179 2603 aaKnown RBP9.49□□□□□ -0.89
VCL-204ENST00000472585 CACNA1DQ01668 2161 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 IGLV3-10A0A075B6K4 115 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 FAM170AA1A519 330 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 BLACEA4D250 179 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 M0QYT0 321 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 NTN3O00634 580 aaPredicted RBP9.49□□□□□ -0.89
VCL-204ENST00000472585 PLD2O14939 933 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 MUSKO15146 869 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 PRNPP04156 253 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 HSP90AA1P07900 732 aaKnown RBP9.49□□□□□ -0.89
VCL-204ENST00000472585 GLI1P08151 1106 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 ADRB3P13945 408 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 JUNDP17535 347 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 WT1P19544 449 aaPredicted RBP9.49□□□□□ -0.89
VCL-204ENST00000472585 SLC9A1P19634 815 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 GNA15P30679 374 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 L1CAMP32004 1257 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 ADKP55263 362 aaKnown RBP9.49□□□□□ -0.89
VCL-204ENST00000472585 RPS21P63220 83 aaKnown RBP9.49□□□□□ -0.89
VCL-204ENST00000472585 ARF5P84085 180 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 CCDC15Q0P6D6 951 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 CCDC40Q4G0X9 1142 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 PTPN20Q4JDL3 420 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 RAB6CQ53S08 254 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 KCTD16Q68DU8 428 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 TRNP1Q6NT89 227 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 C22orf39Q6P5X5 142 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 PARS2Q7L3T8 475 aaKnown RBP9.49□□□□□ -0.89
VCL-204ENST00000472585 TFAP2DQ7Z6R9 452 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 HSCBQ8IWL3 235 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 FBXO39Q8N4B4 442 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 FAM174AQ8TBP5 190 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 CENPTQ96BT3 561 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 DHTKD1Q96HY7 919 aaPredicted RBP9.49□□□□□ -0.89
VCL-204ENST00000472585 FEM1CQ96JP0 617 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 LENG8Q96PV6 779 aaPredicted RBP9.49□□□□□ -0.89
VCL-204ENST00000472585 NPY6RQ99463 290 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 CRACR2AQ9BSW2 395 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 STRADBQ9C0K7 418 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 TKTL2Q9H0I9 626 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 RAB6CQ9H0N0 254 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 EPB41L5Q9HCM4 733 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 PLCB1Q9NQ66 1216 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 MBNL1Q9NR56 388 aaKnown RBP9.49□□□□□ -0.89
VCL-204ENST00000472585 NDFIP2Q9NV92 336 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 RMND1Q9NWS8 449 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 KCNK4Q9NYG8 393 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 IPO11Q9UI26 975 aaKnown RBP9.49□□□□□ -0.89
VCL-204ENST00000472585 FCF1Q9Y324 198 aaKnown RBP9.49□□□□□ -0.89
VCL-204ENST00000472585 PCDHB11Q9Y5F2 797 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 ZFC3H1O60293 1989 aaKnown RBP9.49□□□□□ -0.89
VCL-204ENST00000472585 ITPR2Q14571 2701 aa9.49□□□□□ -0.89
VCL-204ENST00000472585 TMX2-CTNND1H3BSU7 103 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 TPP1O14773 563 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 YY2O15391 372 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 HSF2BPO75031 334 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 RHOCP08134 193 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 LIPCP11150 499 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 HGFP14210 728 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 ITGB7P26010 798 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 NOS2P35228 1153 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 CLCN1P35523 988 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 NEK3P51956 506 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 MARSP56192 900 aaKnown RBP9.48□□□□□ -0.89
VCL-204ENST00000472585 STX17P56962 302 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 KRT83P78385 493 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 SLC6A3Q01959 620 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 EIF3IQ13347 325 aaKnown RBP9.48□□□□□ -0.89
VCL-204ENST00000472585 NCAPHQ15003 741 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 IGFBP7Q16270 282 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 SKIDA1Q1XH10 827 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 CARD16Q5EG05 197 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 EFHC1Q5JVL4 640 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 DPY19L2P1Q6NXN4 242 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 C11orf57Q6ZUT1 292 aaPredicted RBP9.48□□□□□ -0.89
VCL-204ENST00000472585 RAB11FIP2Q7L804 512 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 SETD3Q86TU7 594 aaPredicted RBP9.48□□□□□ -0.89
VCL-204ENST00000472585 PARGQ86W56 976 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 SFTPA2Q8IWL1 248 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 DCAF4L2Q8NA75 395 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 NETO2Q8NC67 525 aa9.48□□□□□ -0.89
VCL-204ENST00000472585 C1orf131Q8NDD1 294 aaKnown RBP9.48□□□□□ -0.89
VCL-204ENST00000472585 ZNF564Q8TBZ8 553 aaPredicted RBP9.48□□□□□ -0.89
VCL-204ENST00000472585 NAT6Q93015 286 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms