RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 GDPD4Q6W3E5 623 aa22.87■■□□□ 1.25
C9orf3-213ENST00000471978 IRF2BP2Q7Z5L9 587 aa22.87■■□□□ 1.25
C9orf3-213ENST00000471978 HNRNPLLQ8WVV9 542 aaKnown RBP22.87■■□□□ 1.25
C9orf3-213ENST00000471978 CASKIN2Q8WXE0 1202 aa22.87■■□□□ 1.25
C9orf3-213ENST00000471978 BAP1Q92560 729 aa22.87■■□□□ 1.25
C9orf3-213ENST00000471978 NXPE2Q96DL1 559 aa22.87■■□□□ 1.25
C9orf3-213ENST00000471978 HMCESQ96FZ2 354 aa22.87■■□□□ 1.25
C9orf3-213ENST00000471978 GDAP1L1Q96MZ0 367 aa22.87■■□□□ 1.25
C9orf3-213ENST00000471978 TTYH3Q9C0H2 523 aa22.87■■□□□ 1.25
C9orf3-213ENST00000471978 NAT10Q9H0A0 1025 aaKnown RBP22.87■■□□□ 1.25
C9orf3-213ENST00000471978 KLC2Q9H0B6 622 aa22.87■■□□□ 1.25
C9orf3-213ENST00000471978 CATSPERBQ9H7T0 1116 aa22.87■■□□□ 1.25
C9orf3-213ENST00000471978 GPR27Q9NS67 375 aa22.87■■□□□ 1.25
C9orf3-213ENST00000471978 RASA4BC9J798 803 aa22.86■■□□□ 1.25
C9orf3-213ENST00000471978 TEX33O43247 280 aa22.86■■□□□ 1.25
C9orf3-213ENST00000471978 RASA4O43374 803 aa22.86■■□□□ 1.25
C9orf3-213ENST00000471978 ALPPL2P10696 532 aa22.86■■□□□ 1.25
C9orf3-213ENST00000471978 DESP17661 470 aa22.86■■□□□ 1.25
C9orf3-213ENST00000471978 TNFAIP3P21580 790 aa22.86■■□□□ 1.25
C9orf3-213ENST00000471978 RABIFP47224 123 aa22.86■■□□□ 1.25
C9orf3-213ENST00000471978 HNRNPKP61978 463 aaKnown RBP eCLIP22.86■■□□□ 1.256e-13■■■□□ 15
C9orf3-213ENST00000471978 RAD51Q06609 339 aa22.86■■□□□ 1.25
C9orf3-213ENST00000471978 FZD2Q14332 565 aa22.86■■□□□ 1.25
C9orf3-213ENST00000471978 INO80DQ53TQ3 878 aaPredicted RBP22.86■■□□□ 1.25
C9orf3-213ENST00000471978 TTC7BQ86TV6 843 aa22.86■■□□□ 1.25
C9orf3-213ENST00000471978 NETO2Q8NC67 525 aa22.86■■□□□ 1.25
C9orf3-213ENST00000471978 ASB12Q8WXK4 309 aa22.86■■□□□ 1.25
C9orf3-213ENST00000471978 ARHGEF26Q96DR7 871 aa22.86■■□□□ 1.25
C9orf3-213ENST00000471978 KLF6Q99612 283 aaPredicted RBP22.86■■□□□ 1.25
C9orf3-213ENST00000471978 TAS2R14Q9NYV8 317 aa22.86■■□□□ 1.25
C9orf3-213ENST00000471978 IPO11Q9UI26 975 aaKnown RBP22.86■■□□□ 1.25
C9orf3-213ENST00000471978 URB1O60287 2271 aaKnown RBP22.85■■□□□ 1.25
C9orf3-213ENST00000471978 LOC400499M0QZD8 3231 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 SPTY2D1-AS1A0A0U1RR47 76 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 NEMP2A6NFY4 417 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 WASH4PA8MWX3 477 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 TMCO5BA8MYB1 307 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 SPINT1O43278 529 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 IGSF6O95976 241 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 GIMD1P0DJR0 217 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 RHOAP61586 193 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 E2F1Q01094 437 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 INSM1Q01101 510 aaPredicted RBP22.85■■□□□ 1.25
C9orf3-213ENST00000471978 OGDHQ02218 1023 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 SERINC3Q13530 473 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 PARP15Q460N3 678 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 ANO6Q4KMQ2 910 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 TMC6Q7Z403 805 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 UMODL1-AS1Q8N2C9 162 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 RFFLQ8WZ73 363 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 SYT11Q9BT88 431 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 SCUBE2Q9NQ36 999 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 NLGN3Q9NZ94 848 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 MYO6Q9UM54 1294 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 CLCA2Q9UQC9 943 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 IGSF10Q6WRI0 2623 aa22.85■■□□□ 1.25
C9orf3-213ENST00000471978 TDRD6O60522 2096 aaKnown RBP22.85■■□□□ 1.25
C9orf3-213ENST00000471978 AREL1O15033 823 aa22.84■■□□□ 1.25
C9orf3-213ENST00000471978 SCAMP1O15126 338 aa22.84■■□□□ 1.25
C9orf3-213ENST00000471978 FGF10O15520 208 aaPredicted RBP22.84■■□□□ 1.25
C9orf3-213ENST00000471978 PDE1CQ14123 709 aaPredicted RBP22.84■■□□□ 1.25
C9orf3-213ENST00000471978 LRRC73Q5JTD7 316 aa22.84■■□□□ 1.25
C9orf3-213ENST00000471978 PPP1R2P3Q6NXS1 205 aa22.84■■□□□ 1.25
C9orf3-213ENST00000471978 PARGQ86W56 976 aa22.84■■□□□ 1.25
C9orf3-213ENST00000471978 DENND6BQ8NEG7 585 aa22.84■■□□□ 1.25
C9orf3-213ENST00000471978 VCPIP1Q96JH7 1222 aa22.84■■□□□ 1.25
C9orf3-213ENST00000471978 RTN4Q9NQC3 1192 aaKnown RBP22.84■■□□□ 1.25
C9orf3-213ENST00000471978 PARVAQ9NVD7 372 aa22.84■■□□□ 1.25
C9orf3-213ENST00000471978 TMEM63CQ9P1W3 806 aa22.84■■□□□ 1.25
C9orf3-213ENST00000471978 MFHAS1Q9Y4C4 1052 aa22.84■■□□□ 1.25
C9orf3-213ENST00000471978 AK5Q9Y6K8 562 aa22.84■■□□□ 1.25
C9orf3-213ENST00000471978 CSF2P04141 144 aa22.83■■□□□ 1.25
C9orf3-213ENST00000471978 CKMT1AP12532 417 aa22.83■■□□□ 1.25
C9orf3-213ENST00000471978 NME1P15531 152 aaKnown RBP22.83■■□□□ 1.25
C9orf3-213ENST00000471978 TPI1P60174 286 aa22.83■■□□□ 1.25
C9orf3-213ENST00000471978 MAMLD1Q13495 774 aa22.83■■□□□ 1.25
C9orf3-213ENST00000471978 PDZD3Q86UT5 571 aa22.83■■□□□ 1.25
C9orf3-213ENST00000471978 CACTIN-AS1Q8N1I8 211 aa22.83■■□□□ 1.25
C9orf3-213ENST00000471978 APOLD1Q96LR9 279 aa22.83■■□□□ 1.25
C9orf3-213ENST00000471978 BPIFA3Q9BQP9 254 aa22.83■■□□□ 1.25
C9orf3-213ENST00000471978 DUSP23Q9BVJ7 150 aa22.83■■□□□ 1.25
C9orf3-213ENST00000471978 NRSN2Q9GZP1 204 aa22.83■■□□□ 1.25
C9orf3-213ENST00000471978 GPATCH2LQ9NWQ4 482 aa22.83■■□□□ 1.25
C9orf3-213ENST00000471978 ATRXP46100 2492 aa22.83■■□□□ 1.24
C9orf3-213ENST00000471978 LRRC53A6NM62 1247 aa22.82■■□□□ 1.24
C9orf3-213ENST00000471978 H3BM21 787 aa22.82■■□□□ 1.24
C9orf3-213ENST00000471978 K7ESM1 405 aa22.82■■□□□ 1.24
C9orf3-213ENST00000471978 NEBLO76041 1014 aa22.82■■□□□ 1.24
C9orf3-213ENST00000471978 MYF5P13349 255 aa22.82■■□□□ 1.24
C9orf3-213ENST00000471978 HOXB3P14651 431 aaPredicted RBP22.82■■□□□ 1.24
C9orf3-213ENST00000471978 PSMA2P25787 234 aa22.82■■□□□ 1.24
C9orf3-213ENST00000471978 HTR7P34969 479 aa22.82■■□□□ 1.24
C9orf3-213ENST00000471978 SEMG2Q02383 582 aa22.82■■□□□ 1.24
C9orf3-213ENST00000471978 CYTH1Q15438 398 aa22.82■■□□□ 1.24
C9orf3-213ENST00000471978 TPRG1LQ5T0D9 272 aa22.82■■□□□ 1.24
C9orf3-213ENST00000471978 KDM7AQ6ZMT4 941 aa22.82■■□□□ 1.24
C9orf3-213ENST00000471978 DCBLD1Q8N8Z6 715 aa22.82■■□□□ 1.24
C9orf3-213ENST00000471978 ZNF548Q8NEK5 533 aaPredicted RBP22.82■■□□□ 1.24
C9orf3-213ENST00000471978 CXorf40AQ8TE69 158 aa22.82■■□□□ 1.24
C9orf3-213ENST00000471978 CENPTQ96BT3 561 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms