RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 PABPC3Q9H361 631 aaKnown RBP13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PTGFRNQ9P2B2 879 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 GSTK1Q9Y2Q3 226 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 NOX1Q9Y5S8 564 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 LDLRP01130 860 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CHRNGP07510 517 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SV2AQ7L0J3 742 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CCNJLQ8IV13 435 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 HTR3CQ8WXA8 447 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MLPHQ9BV36 600 aaPredicted RBP13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 C1QTNF1Q9BXJ1 281 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CRISPLD1Q9H336 500 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 RABGEF1Q9UJ41 708 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ASF1AQ9Y294 204 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 TTC34A8MYJ7 566 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 LRPAP1P30533 357 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 IRAK1P51617 712 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 RGS1Q08116 209 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MPP2Q14168 576 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PABPC1LQ4VXU2 614 aaKnown RBP13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MAGEE2Q8TD90 523 aaPredicted RBP13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 HELQQ8TDG4 1101 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 TMEM237Q96Q45 408 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CIDEBQ9UHD4 219 aa13.36□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 GAKO14976 1311 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ADGRA3Q8IWK6 1321 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 RASGRP1O95267 797 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 RPL9P32969 192 aaKnown RBP13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SLC26A11Q86WA9 606 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 DHFR2Q86XF0 187 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CYP2W1Q8TAV3 490 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SLC5A5Q92911 643 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 EPB41L1Q9H4G0 881 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ETS1P14921 441 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CFAP52Q8N1V2 620 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 DENND6BQ8NEG7 585 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 REPS2Q8NFH8 660 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 DNAJB14Q8TBM8 379 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 KAT2AQ92830 837 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SENP8Q96LD8 212 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ABHD16BQ9H3Z7 469 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 DNMT3LQ9UJW3 386 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 NEDD8-MDP1E9PL57 170 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ASNA1O43681 348 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SLC25A14O95258 325 aaPredicted RBP13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CXCL14O95715 111 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CCNYL3P0C7X3 344 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CALB2P22676 271 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 BDH1Q02338 343 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PRSS58Q8IYP2 241 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 C12orf50Q8NA57 414 aaPredicted RBP13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ZNF558Q96NG5 402 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MRPL9Q9BYD2 267 aaKnown RBP13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 NMRAL1Q9HBL8 299 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 C1QTNF3-AMACRE9PGA6 284 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CLOCKO15516 846 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 KCNH1O95259 989 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ANXA6P08133 673 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 FCGR1AP12314 374 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SLC7A2P52569 658 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MAXP61244 160 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PSRC1Q6PGN9 363 aaPredicted RBP13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 TC2NQ8N9U0 490 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 BPIFB6Q8NFQ5 453 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 WHRNQ9P202 907 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MAGEA13PA6NCF6 341 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CATP04040 527 aaKnown RBP13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CXCR2P25025 360 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ALDH3A2P51648 485 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 WSCD1Q658N2 575 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 GPR135Q8IZ08 494 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 FIBCD1Q8N539 461 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 EHD3Q9NZN3 535 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 NQO1P15559 274 aaKnown RBP13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PER3P56645 1201 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 KCNT2Q6UVM3 1135 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 COL23A1Q86Y22 540 aaPredicted RBP13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 UGT2B28Q9BY64 529 aa13.35□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 TNS3Q68CZ2 1445 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ZNF879B4DU55 563 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SLCO1B7G3V0H7 640 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 HMGCRP04035 888 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CYP17A1P05093 508 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 TAS2R41P59536 307 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PPP2R2BQ00005 443 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MBTD1Q05BQ5 628 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ZC3H12AQ5D1E8 599 aaKnown RBP13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ZBTB46Q86UZ6 589 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PHF10Q8WUB8 498 aaKnown RBP13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ATL1Q8WXF7 558 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SLC27A6Q9Y2P4 619 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SCNN1GP51170 649 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PTPN5P54829 565 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 GRTP1Q5TC63 336 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 TAGLN3Q9UI15 199 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CCDC163A0A0D9SF12 145 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 DNTTP04053 509 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 TARBP2Q15633 366 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms