RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 C1orf228Q6PIY5 440 aa3.96□□□□□ -1.78
RBM39-228ENST00000471635 MEX3BQ6ZN04 569 aaKnown RBP3.96□□□□□ -1.78
RBM39-228ENST00000471635 CACNA2D3Q8IZS8 1091 aa3.96□□□□□ -1.78
RBM39-228ENST00000471635 GHDCQ8N2G8 530 aa3.96□□□□□ -1.78
RBM39-228ENST00000471635 ZNF114Q8NC26 417 aa3.96□□□□□ -1.78
RBM39-228ENST00000471635 SETD9Q8NE22 299 aa3.96□□□□□ -1.78
RBM39-228ENST00000471635 LINS1Q8NG48 757 aa3.96□□□□□ -1.78
RBM39-228ENST00000471635 RFWD2Q8NHY2 731 aa3.96□□□□□ -1.78
RBM39-228ENST00000471635 KTI12Q96EK9 354 aaPredicted RBP3.96□□□□□ -1.78
RBM39-228ENST00000471635 PCGF6Q9BYE7 350 aa3.96□□□□□ -1.78
RBM39-228ENST00000471635 SDF2L1Q9HCN8 221 aa3.96□□□□□ -1.78
RBM39-228ENST00000471635 G6PC2Q9NQR9 355 aa3.96□□□□□ -1.78
RBM39-228ENST00000471635 ATP8A2Q9NTI2 1148 aa3.96□□□□□ -1.78
RBM39-228ENST00000471635 NFS1Q9Y697 457 aa3.96□□□□□ -1.78
RBM39-228ENST00000471635 BMPR1BO00238 502 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 CLGNO14967 610 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 CTPS1P17812 591 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 HILS1P60008 231 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 FAM27E3Q08E93 113 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 LPIN1Q14693 890 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 RPE65Q16518 533 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 FBXO43Q4G163 708 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 CCDC38Q502W7 563 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 DSTYKQ6XUX3 929 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 ZNF771Q7L3S4 317 aaPredicted RBP3.95□□□□□ -1.78
RBM39-228ENST00000471635 MB21D2Q8IYB1 491 aaPredicted RBP3.95□□□□□ -1.78
RBM39-228ENST00000471635 POC1AQ8NBT0 407 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 NEK9Q8TD19 979 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 RUBCNQ92622 972 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 BICD1Q96G01 975 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 RBM17Q96I25 401 aaKnown RBP3.95□□□□□ -1.78
RBM39-228ENST00000471635 SPRY4Q9C004 299 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 HDAC6Q9UBN7 1215 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 GRHPRQ9UBQ7 328 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 SRP68Q9UHB9 627 aaKnown RBP3.95□□□□□ -1.78
RBM39-228ENST00000471635 PAM16Q9Y3D7 125 aa3.95□□□□□ -1.78
RBM39-228ENST00000471635 NOTCH3Q9UM47 2321 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 SMCHD1A6NHR9 2005 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 PRAC2D3DTV9 90 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 NPIPB11E5RHQ5 1161 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 F5H423 210 aaPredicted RBP3.94□□□□□ -1.78
RBM39-228ENST00000471635 J3KR12 359 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 CST5P28325 142 aaPredicted RBP3.94□□□□□ -1.78
RBM39-228ENST00000471635 SSTR2P30874 369 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 FMO4P31512 558 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 KRTAP10-12P60413 245 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 SLC18A2Q05940 514 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 ILF3Q12906 894 aaKnown RBP eCLIP3.94□□□□□ -1.78
RBM39-228ENST00000471635 DCAF6Q58WW2 860 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 MON1AQ86VX9 555 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 MYLK4Q86YV6 388 aaPredicted RBP3.94□□□□□ -1.78
RBM39-228ENST00000471635 CCDC105Q8IYK2 499 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 AADATQ8N5Z0 425 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 MCPH1Q8NEM0 835 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 POF1BQ8WVV4 589 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 TRIB2Q92519 343 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 RNF183Q96D59 192 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 SCMH1Q96GD3 660 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 HES6Q96HZ4 224 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 EPYCQ99645 322 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 CHODLQ9H9P2 273 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 OR6C3Q9NZP0 311 aa3.94□□□□□ -1.78
RBM39-228ENST00000471635 MORC2Q9Y6X9 1032 aaPredicted RBP3.94□□□□□ -1.78
RBM39-228ENST00000471635 MAGEA13PA6NCF6 341 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 TULP2O00295 520 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 IPO5O00410 1097 aaKnown RBP3.93□□□□□ -1.78
RBM39-228ENST00000471635 LMX1BO60663 402 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 VNN2O95498 520 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 ADAP00813 363 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 SERPINC1P01008 464 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 SP1P08047 785 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 DHRS4L1P0CG22 281 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 TFPIP10646 304 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 AMD1P17707 334 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 MYF6P23409 242 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 HTR3AP46098 478 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 MCM2P49736 904 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 ARSFP54793 590 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 GOLGA8FQ08AF8 430 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 ST3GAL1Q11201 340 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 FOXO1Q12778 655 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 CUL4BQ13620 913 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 SETMARQ53H47 684 aaPredicted RBP3.93□□□□□ -1.78
RBM39-228ENST00000471635 STPG1Q5TH74 334 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 GJB7Q6PEY0 223 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 KLHL24Q6TFL4 600 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 EXOC3L1Q86VI1 746 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 DENND6AQ8IWF6 608 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 ANKRD44Q8N8A2 993 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 DNAAF1Q8NEP3 725 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 VPS37AQ8NEZ2 397 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 SECTM1Q8WVN6 248 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 MTBPQ96DY7 904 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 LTV1Q96GA3 475 aaPredicted RBP3.93□□□□□ -1.78
RBM39-228ENST00000471635 YME1L1Q96TA2 773 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 PCDHAC2Q9Y5I4 1007 aa3.93□□□□□ -1.78
RBM39-228ENST00000471635 hDV102S1A0JD36 115 aa3.92□□□□□ -1.78
RBM39-228ENST00000471635 PRR23AA6NEV1 266 aa3.92□□□□□ -1.78
RBM39-228ENST00000471635 XPNPEP2O43895 674 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms