RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 CAPZA1P52907 286 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 ARFIP1P53367 373 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 RIN1Q13671 783 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 CBFBQ13951 182 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 FGFBP1Q14512 234 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 RNF151Q2KHN1 245 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 ATG9BQ674R7 924 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 PMS2CLQ68D20 193 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 PPP1R21Q6ZMI0 780 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 SPATA19Q7Z5L4 167 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 TADA2BQ86TJ2 420 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 FAM83AQ86UY5 434 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 ATAD1Q8NBU5 361 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 HJURPQ8NCD3 748 aaPredicted RBP6.31□□□□□ -1.4
NF1-208ENST00000471572 NOC3LQ8WTT2 800 aaKnown RBP6.31□□□□□ -1.4
NF1-208ENST00000471572 GLMPQ8WWB7 406 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 SYAP1Q96A49 352 aaPredicted RBP6.31□□□□□ -1.4
NF1-208ENST00000471572 ZNF512Q96ME7 567 aaPredicted RBP6.31□□□□□ -1.4
NF1-208ENST00000471572 HS6ST2Q96MM7 605 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 SPATA25Q9BR10 227 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.31□□□□□ -1.4
NF1-208ENST00000471572 PCDH18Q9HCL0 1135 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 MBNL3Q9NUK0 354 aaKnown RBP6.31□□□□□ -1.4
NF1-208ENST00000471572 ABCB8Q9NUT2 735 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 ANO10Q9NW15 660 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 TAS2R3Q9NYW6 316 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 HAO1Q9UJM8 370 aa6.31□□□□□ -1.4
NF1-208ENST00000471572 PIN4Q9Y237 131 aaKnown RBP6.31□□□□□ -1.4
NF1-208ENST00000471572 SPAG9O60271 1321 aaKnown RBP6.31□□□□□ -1.4
NF1-208ENST00000471572 CD109Q6YHK3 1445 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 MATN2O00339 956 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 ZNF185O15231 689 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 HS6ST1O60243 411 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 SIX3O95343 332 aaPredicted RBP6.3□□□□□ -1.4
NF1-208ENST00000471572 TYMPP19971 482 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 HOXA13P31271 388 aaPredicted RBP6.3□□□□□ -1.4
NF1-208ENST00000471572 IGHMBP2P38935 993 aaKnown RBP6.3□□□□□ -1.4
NF1-208ENST00000471572 NPRL3Q12980 569 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 USP10Q14694 798 aaKnown RBP6.3□□□□□ -1.4
NF1-208ENST00000471572 KRT79Q5XKE5 535 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 TXNDC8Q6A555 127 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 MEX3BQ6ZN04 569 aaKnown RBP6.3□□□□□ -1.4
NF1-208ENST00000471572 FAM160B2Q86V87 743 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 HOOK3Q86VS8 718 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 KDM1BQ8NB78 822 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 C11orf65Q8NCR3 313 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 BICD1Q96G01 975 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 PNKPQ96T60 521 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 SLC5A7Q9GZV3 580 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 OSGEPL1Q9H4B0 414 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 TASP1Q9H6P5 420 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 PAK6Q9NQU5 681 aaPredicted RBP6.3□□□□□ -1.4
NF1-208ENST00000471572 GDE1Q9NZC3 331 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 KIAA1456Q9P272 454 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 A4GNTQ9UNA3 340 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 KIF13AQ9H1H9 1805 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 A0A1B0GVM2 712 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 C3orf70A6NLC5 250 aaPredicted RBP6.3□□□□□ -1.4
NF1-208ENST00000471572 LRRC53A6NM62 1247 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 A8MVJ9 347 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 HEXBP07686 556 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 SRPRAP08240 638 aaKnown RBP6.3□□□□□ -1.4
NF1-208ENST00000471572 MMP9P14780 707 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 CD19P15391 556 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 FERP16591 822 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 LUMP51884 338 aaPredicted RBP6.3□□□□□ -1.4
NF1-208ENST00000471572 YPEL5P62699 121 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 RALGDSQ12967 914 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 ST3GAL2Q16842 350 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 C15orf59Q2T9L4 293 aaPredicted RBP6.3□□□□□ -1.4
NF1-208ENST00000471572 COL28A1Q2UY09 1125 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 CD300EQ496F6 205 aaPredicted RBP6.3□□□□□ -1.4
NF1-208ENST00000471572 HMBOX1Q6NT76 420 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 KDELC1Q6UW63 502 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 DPY19L3Q6ZPD9 716 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 ENDOVQ8N8Q3 282 aaKnown RBP6.3□□□□□ -1.4
NF1-208ENST00000471572 IQUBQ8NA54 791 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 CTHRC1Q96CG8 243 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 TCF25Q9BQ70 676 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 ZSWIM1Q9BR11 485 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 NUP85Q9BW27 656 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 GOLPH3LQ9H4A5 285 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 RABL2AQ9UBK7 228 aaPredicted RBP6.3□□□□□ -1.4
NF1-208ENST00000471572 UPB1Q9UBR1 384 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 IL19Q9UHD0 177 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 HOOK1Q9UJC3 728 aaKnown RBP6.3□□□□□ -1.4
NF1-208ENST00000471572 FBXL5Q9UKA1 691 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 IKBKGQ9Y6K9 419 aa6.3□□□□□ -1.4
NF1-208ENST00000471572 PRR5-ARHGAP8B1AHC4 643 aa6.29□□□□□ -1.4
NF1-208ENST00000471572 PPM1DO15297 605 aa6.29□□□□□ -1.4
NF1-208ENST00000471572 IPO13O94829 963 aaKnown RBP6.29□□□□□ -1.4
NF1-208ENST00000471572 GNAQP50148 359 aa6.29□□□□□ -1.4
NF1-208ENST00000471572 ANXA11P50995 505 aaKnown RBP6.29□□□□□ -1.4
NF1-208ENST00000471572 CYP4A11Q02928 519 aa6.29□□□□□ -1.4
NF1-208ENST00000471572 LMAN2Q12907 356 aa6.29□□□□□ -1.4
NF1-208ENST00000471572 DNASE1L3Q13609 305 aa6.29□□□□□ -1.4
NF1-208ENST00000471572 IQCHQ86VS3 1027 aa6.29□□□□□ -1.4
NF1-208ENST00000471572 RTL3Q8N8U3 475 aaKnown RBP6.29□□□□□ -1.4
NF1-208ENST00000471572 CHFRQ96EP1 664 aa6.29□□□□□ -1.4
NF1-208ENST00000471572 YTHDC1Q96MU7 727 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms