RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 DUOXA1Q1HG43 343 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 MARC1Q5VT66 337 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 NEK5Q6P3R8 708 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 BZW1Q7L1Q6 419 aaKnown RBP15.49■□□□□ 0.07
SDC3-203ENST00000471567 PEX26Q7Z412 305 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 SRLQ86TD4 932 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 NT5DC3Q86UY8 548 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 TEX26Q8N6G2 289 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 MAML1Q92585 1016 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 RAB7BQ96AH8 199 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 BIRC7Q96CA5 298 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 HDAC11Q96DB2 347 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 ZNF641Q96N77 438 aaPredicted RBP15.49■□□□□ 0.07
SDC3-203ENST00000471567 PREBQ9HCU5 417 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 TMEM74BQ9NUR3 256 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 DKK3Q9UBP4 350 aa15.49■□□□□ 0.07
SDC3-203ENST00000471567 TNRC6BQ9UPQ9 1833 aaKnown RBP15.48■□□□□ 0.07
SDC3-203ENST00000471567 hCG_1818297A0A087WSY0 165 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 TBC1D3DA0A087WVF3 549 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 TBC1D3IA0A087WXS9 549 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 TBC1D3EA0A087X179 549 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 TBC1D3KA0A087X1G2 549 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 TBC1D3FA6NER0 549 aaPredicted RBP15.48■□□□□ 0.07
SDC3-203ENST00000471567 FAM47DPA6NHR8 397 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 C16orf96A6NNT2 1141 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 MIF4GDA9UHW6 222 aaKnown RBP15.48■□□□□ 0.07
SDC3-203ENST00000471567 TBC1D3LB9A6J9 549 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 KHNYNO15037 678 aaKnown RBP15.48■□□□□ 0.07
SDC3-203ENST00000471567 INSIG1O15503 277 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 AP1G1O43747 822 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 FSBPO95073 299 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 UGT2B4P06133 528 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 IGHV4-34P06331 123 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 TBC1D3HP0C7X1 549 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 ADRB3P13945 408 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 NUDT1P36639 197 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 NR2C2P49116 596 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 PEX5P50542 639 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 RWDD2BP57060 319 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 TAS2R38P59533 333 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 AP1S1P61966 158 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 PDK1Q15118 436 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 RALGPS1Q5JS13 557 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 TBC1D3GQ6DHY5 549 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 TBC1D3CQ6IPX1 549 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 FBXL19Q6PCT2 694 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 PRR23CQ6ZRP0 262 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 TRIM69Q86WT6 500 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 TBC1D3Q8IZP1 549 aaPredicted RBP15.48■□□□□ 0.07
SDC3-203ENST00000471567 EXOC2Q96KP1 924 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 KLHL32Q96NJ5 620 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 BRD8Q9H0E9 1235 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 HAUS2Q9NVX0 235 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 AMACRQ9UHK6 382 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 GUCA1BQ9UMX6 200 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 EFR3BQ9Y2G0 817 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 HEY1Q9Y5J3 304 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 RALGAPA1Q6GYQ0 2036 aa15.48■□□□□ 0.07
SDC3-203ENST00000471567 PRR5-ARHGAP8B1AHC4 643 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 MUSKO15146 869 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 CST8O60676 142 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 MAP3K6O95382 1288 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 CR2P20023 1033 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 TGM2P21980 687 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 CD27P26842 260 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 MAOBP27338 520 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 CETN2P41208 172 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 MMP13P45452 471 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 RGRP47804 291 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 SUOXP51687 545 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 LMNB2Q03252 620 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 PPIDQ08752 370 aaKnown RBP15.47■□□□□ 0.07
SDC3-203ENST00000471567 CCDC6Q16204 474 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 SLC23A3Q6PIS1 610 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 PARS2Q7L3T8 475 aaKnown RBP15.47■□□□□ 0.07
SDC3-203ENST00000471567 ZSCAN30Q86W11 494 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 CCDC50Q8IVM0 306 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 CCDC13Q8IYE1 715 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 UBL4BQ8N7F7 174 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 C12orf50Q8NA57 414 aaPredicted RBP15.47■□□□□ 0.07
SDC3-203ENST00000471567 CCNYQ8ND76 341 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 C1orf216Q8TAB5 229 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 PDLIM2Q96JY6 352 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 NUDCD1Q96RS6 583 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 MGME1Q9BQP7 344 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 SUV39H2Q9H5I1 410 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 ATP13A3Q9H7F0 1226 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 EIF2B4Q9UI10 523 aaKnown RBP15.47■□□□□ 0.07
SDC3-203ENST00000471567 SLC6A14Q9UN76 642 aa15.47■□□□□ 0.07
SDC3-203ENST00000471567 ATXN2Q99700 1313 aaKnown RBP15.46■□□□□ 0.07
SDC3-203ENST00000471567 A0A1B0GTW7 788 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.46■□□□□ 0.07
SDC3-203ENST00000471567 A0A1W2PPC4 97 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 TSPAN11A1L157 253 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 PPP1R12AO14974 1030 aaPredicted RBP15.46■□□□□ 0.07
SDC3-203ENST00000471567 LATO43561 262 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 SERPINF2P08697 491 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 KRT10P13645 584 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 CCNB1P14635 433 aa15.46■□□□□ 0.07
SDC3-203ENST00000471567 CES1P23141 567 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms