RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 CACNA2D3Q8IZS8 1091 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 SCML4Q8N228 414 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 FSTL5Q8N475 847 aaPredicted RBP6.99□□□□□ -1.29
HDAC1-204ENST00000471488 PAF1Q8N7H5 531 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 FAM46DQ8NEK8 389 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 OR7D4Q8NG98 312 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 CXorf40AQ8TE69 158 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 KAT5Q92993 513 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 KIAA1143Q96AT1 154 aaPredicted RBP6.99□□□□□ -1.29
HDAC1-204ENST00000471488 ABHD17AQ96GS6 310 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 HSFY1Q96LI6 401 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 HEPHQ9BQS7 1158 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 C1QTNF7Q9BXJ2 289 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 SLC12A9Q9BXP2 914 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 DPEP2Q9H4A9 486 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 ATP13A1Q9HD20 1204 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 MBNL1Q9NR56 388 aaKnown RBP6.99□□□□□ -1.29
HDAC1-204ENST00000471488 PPP4R2Q9NY27 417 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 LRIT1Q9P2V4 623 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 KLQ9UEF7 1012 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 KIAA1257Q9ULG3 409 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 TRAF3IP3Q9Y228 551 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 COQ6Q9Y2Z9 468 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 FCF1Q9Y324 198 aaKnown RBP6.99□□□□□ -1.29
HDAC1-204ENST00000471488 ACTL7AQ9Y615 435 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 HS3ST4Q9Y661 456 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 NOTCH2Q04721 2471 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 TEP1Q99973 2627 aaKnown RBP6.98□□□□□ -1.29
HDAC1-204ENST00000471488 TRPM6Q9BX84 2022 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 A0A1B0GVL5 298 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 C16orf96A6NNT2 1141 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 TTLL8A6PVC2 850 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 RHPN2P1A8MT19 583 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 RNF225M0QZC1 329 aaPredicted RBP6.98□□□□□ -1.29
HDAC1-204ENST00000471488 CETN3O15182 167 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 TSPAN6O43657 245 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 PAGE1O75459 146 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 TM7SF2O76062 418 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 LETM1O95202 739 aaPredicted RBP6.98□□□□□ -1.29
HDAC1-204ENST00000471488 YEATS4O95619 227 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 PCCBP05166 539 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 UGT2B4P06133 528 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 PAEPP09466 180 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 HTR1BP28222 390 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 OR1E1P30953 314 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 USP8P40818 1118 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 ABL2P42684 1182 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 ACADSBP45954 432 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 NOP2P46087 812 aaKnown RBP6.98□□□□□ -1.29
HDAC1-204ENST00000471488 HK3P52790 923 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 CDH4P55283 916 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 RNASE9P60153 205 aaKnown RBP6.98□□□□□ -1.29
HDAC1-204ENST00000471488 PFN3P60673 137 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 KLRB1Q12918 225 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 C16orf72Q14CZ0 275 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 STILQ15468 1287 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 CNGA2Q16280 664 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 ARHGAP44Q17R89 818 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 ALFQ53S48 1182 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 CARD16Q5EG05 197 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 SNAP47Q5SQN1 464 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 ATP1A1-AS1Q5TC04 95 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 NYAP1Q6ZVC0 841 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 TTC7BQ86TV6 843 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 HEATR4Q86WZ0 1026 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 SFTPA2Q8IWL1 248 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 DRC7Q8IY82 874 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 DEFB106AQ8N104 65 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 CCDC112Q8NEF3 446 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 SPATA20Q8TB22 786 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 SSC4DQ8WTU2 575 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 ART4Q93070 314 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 NKD1Q969G9 470 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 PMEPA1Q969W9 287 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 TMEM159Q96B96 161 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 ALG14Q96F25 216 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 NT5C1BQ96P26 610 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 MED15Q96RN5 788 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 PSMB7Q99436 277 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 KLF6Q99612 283 aaPredicted RBP6.98□□□□□ -1.29
HDAC1-204ENST00000471488 EPAS1Q99814 870 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 PRMT1Q99873 361 aaKnown RBP6.98□□□□□ -1.29
HDAC1-204ENST00000471488 ZSWIM1Q9BR11 485 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 C1QTNF2Q9BXJ5 285 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 SRRTQ9BXP5 876 aaKnown RBP6.98□□□□□ -1.29
HDAC1-204ENST00000471488 GTPBP4Q9BZE4 634 aaKnown RBP6.98□□□□□ -1.29
HDAC1-204ENST00000471488 EDEM3Q9BZQ6 932 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 GPN2Q9H9Y4 310 aaPredicted RBP6.98□□□□□ -1.29
HDAC1-204ENST00000471488 CASS4Q9NQ75 786 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 GPR27Q9NS67 375 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 SLC39A1Q9NY26 324 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 MPP6Q9NZW5 540 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 HECAQ9UBI9 543 aaPredicted RBP6.98□□□□□ -1.29
HDAC1-204ENST00000471488 ACSL6Q9UKU0 697 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 PCDHA7Q9UN72 937 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 HS3ST2Q9Y278 367 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 TP53TG5Q9Y2B4 290 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 OR1A2Q9Y585 309 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 WASF2Q9Y6W5 498 aa6.98□□□□□ -1.29
HDAC1-204ENST00000471488 LRRK2Q5S007 2527 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms