RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 ANGPTL2Q9UKU9 493 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 MFHAS1Q9Y4C4 1052 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 PCDHGA5Q9Y5G8 931 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 CPQQ9Y646 472 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 CNOT1A5YKK6 2376 aaKnown RBP9.3□□□□□ -0.92
PTPRE-207ENST00000471218 SDR42E2A6NKP2 422 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 SRRM3A6NNA2 597 aaPredicted RBP9.29□□□□□ -0.92
PTPRE-207ENST00000471218 KCNK1O00180 336 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 DFFAO00273 331 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 FAM155BO75949 473 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 NEBLO76041 1014 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 LUC7L3O95232 432 aaKnown RBP9.29□□□□□ -0.92
PTPRE-207ENST00000471218 METTL18O95568 372 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 PEX11BO96011 259 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 JCHAINP01591 159 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 KLKB1P03952 638 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 AVPR1AP37288 418 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 LMAN1P49257 510 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 PAPOLAP51003 745 aaKnown RBP9.29□□□□□ -0.92
PTPRE-207ENST00000471218 GNA12Q03113 381 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 SLC20A2Q08357 652 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 USP4Q13107 963 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 DMC1Q14565 340 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 KRT71Q3SY84 523 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 AASDHQ4L235 1098 aaPredicted RBP9.29□□□□□ -0.92
PTPRE-207ENST00000471218 MPPE1Q53F39 396 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 ALFQ53S48 1182 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 CEP85LQ5SZL2 805 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 STEAP4Q687X5 459 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 TAOK1Q7L7X3 1001 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 CAND1Q86VP6 1230 aaKnown RBP9.29□□□□□ -0.92
PTPRE-207ENST00000471218 WDR5BQ86VZ2 330 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 DENND1CQ8IV53 801 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 CMTM8Q8IZV2 173 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 CAMKK1Q8N5S9 505 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 DCAF4L2Q8NA75 395 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 SHKBP1Q8TBC3 707 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 PEX13Q92968 403 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 ARHGEF2Q92974 986 aaKnown RBP9.29□□□□□ -0.92
PTPRE-207ENST00000471218 IGSF8Q969P0 613 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 TADA1Q96BN2 335 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 TCEAL4Q96EI5 215 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 PRICKLE1Q96MT3 831 aaPredicted RBP9.29□□□□□ -0.92
PTPRE-207ENST00000471218 PSKH2Q96QS6 385 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 CYTH2Q99418 400 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 EBNA1BP2Q99848 306 aaKnown RBP9.29□□□□□ -0.92
PTPRE-207ENST00000471218 C19orf43Q9BQ61 176 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 ATXN3LQ9H3M9 355 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 CNOT10Q9H9A5 744 aaKnown RBP9.29□□□□□ -0.92
PTPRE-207ENST00000471218 ARNT2Q9HBZ2 717 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 MRM3Q9HC36 420 aaKnown RBP9.29□□□□□ -0.92
PTPRE-207ENST00000471218 BFARQ9NZS9 450 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 MPP6Q9NZW5 540 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 SEPT3Q9UH03 358 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 SH3BP1Q9Y3L3 701 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 SNX10Q9Y5X0 201 aa9.29□□□□□ -0.92
PTPRE-207ENST00000471218 NOTCH4Q99466 2003 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 SPECC1L-ADORA2AF8WAN1 911 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 ARNTLO00327 626 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 ZBTB24O43167 697 aaPredicted RBP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 HRO43593 1189 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 KDELR3O43731 214 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 ALDH1A2O94788 518 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 ACSL3O95573 720 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 CPP00450 1065 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 CYBBP04839 570 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 HMBSP08397 361 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 ZNF806P0C7X5 589 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 PGAM1P18669 254 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 PRKCHP24723 683 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 CNTFP26441 200 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 PSMB4P28070 264 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 OAS2P29728 719 aaKnown RBP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 SLC6A4P31645 630 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 CD68P34810 354 aaPredicted RBP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 VIPR2P41587 438 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 MAPK8P45983 427 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 VASPP50552 380 aaPredicted RBP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 PLK1P53350 603 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 SHC2P98077 582 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 SATB1Q01826 763 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 GRSF1Q12849 480 aaKnown RBP eCLIP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 CDH17Q12864 832 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 ZBTB17Q13105 803 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 KYNUQ16719 465 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 FBXO43Q4G163 708 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 TXNDC8Q6A555 127 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 POTEHQ6S545 545 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 ZNF534Q76KX8 674 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 NLRP9Q7RTR0 991 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 C11orf74Q86VG3 221 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 ARID3BQ8IVW6 561 aaPredicted RBP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 PALM2Q8IXS6 379 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 CNTD1Q8N815 330 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 ARL14EPQ8N8R7 260 aaPredicted RBP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 GABPB2Q8TAK5 448 aaPredicted RBP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 FAM76AQ8TAV0 307 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 GSDMBQ8TAX9 411 aa9.28□□□□□ -0.92
PTPRE-207ENST00000471218 SCG3Q8WXD2 468 aaKnown RBP9.28□□□□□ -0.92
PTPRE-207ENST00000471218 TTC17Q96AE7 1141 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms