RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 ALFQ53S48 1182 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 ZFYVE27Q5T4F4 411 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 AGBL4Q5VU57 503 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 RNF219Q5W0B1 726 aaPredicted RBP11.78□□□□□ -0.52
HLA-C-206ENST00000470363 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.78□□□□□ -0.52
HLA-C-206ENST00000470363 FAM131BQ86XD5 332 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 GATAD2AQ86YP4 633 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 RHOT1Q8IXI2 618 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 SH2D3CQ8N5H7 860 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 CCDC185Q8N715 623 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 MDM1Q8TC05 714 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 TSC1Q92574 1164 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 MS4A14Q96JA4 679 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 CAPZA3Q96KX2 299 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 C1orf74Q96LT6 269 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 RPRD1AQ96P16 312 aaPredicted RBP11.78□□□□□ -0.52
HLA-C-206ENST00000470363 OSBPL9Q96SU4 736 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 LCMT1Q9UIC8 334 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 HS3ST2Q9Y278 367 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 PCDHA3Q9Y5H8 950 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 SAR1BQ9Y6B6 198 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 TMEM131Q92545 1883 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 PLXNA2O75051 1894 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 TBC1D3DA0A087WVF3 549 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 TBC1D3IA0A087WXS9 549 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 TBC1D3EA0A087X179 549 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 TBC1D3KA0A087X1G2 549 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.77□□□□□ -0.53
HLA-C-206ENST00000470363 TBC1D3FA6NER0 549 aaPredicted RBP11.77□□□□□ -0.53
HLA-C-206ENST00000470363 MIF4GDA9UHW6 222 aaKnown RBP11.77□□□□□ -0.53
HLA-C-206ENST00000470363 TBC1D3LB9A6J9 549 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 ALOX15BO15296 676 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 SLC7A4O43246 635 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 PRPSAP2O60256 369 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 CEP104O60308 925 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 ZNF821O75541 412 aaPredicted RBP11.77□□□□□ -0.53
HLA-C-206ENST00000470363 CTSLP07711 333 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 TBC1D3HP0C7X1 549 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 SRCP12931 536 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 NNMTP40261 264 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 C21orf59P57076 290 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 CNTN1Q12860 1018 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 ZNF177Q13360 481 aaPredicted RBP11.77□□□□□ -0.53
HLA-C-206ENST00000470363 CA9Q16790 459 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 HADHQ16836 314 aaKnown RBP11.77□□□□□ -0.53
HLA-C-206ENST00000470363 TBC1D3GQ6DHY5 549 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 TBC1D3CQ6IPX1 549 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 CYP4V2Q6ZWL3 525 aaPredicted RBP11.77□□□□□ -0.53
HLA-C-206ENST00000470363 STRADAQ7RTN6 431 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 ADAT2Q7Z6V5 191 aaKnown RBP11.77□□□□□ -0.53
HLA-C-206ENST00000470363 TRIM69Q86WT6 500 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 TBC1D3Q8IZP1 549 aaPredicted RBP11.77□□□□□ -0.53
HLA-C-206ENST00000470363 UBL4BQ8N7F7 174 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 MFSD2AQ8NA29 543 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 OR2A12Q8NGT7 310 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 RAPGEF5Q92565 580 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 HSPH1Q92598 858 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 RNF25Q96BH1 459 aaPredicted RBP11.77□□□□□ -0.53
HLA-C-206ENST00000470363 SERAC1Q96JX3 654 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 TKTL2Q9H0I9 626 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 CCDC86Q9H6F5 360 aaKnown RBP11.77□□□□□ -0.53
HLA-C-206ENST00000470363 RRN3Q9NYV6 651 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 SMARCAL1Q9NZC9 954 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 PCDHGA1Q9Y5H4 931 aa11.77□□□□□ -0.53
HLA-C-206ENST00000470363 COL5A1P20908 1838 aaPredicted RBP11.76□□□□□ -0.53
HLA-C-206ENST00000470363 KNTC1P50748 2209 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 ATRXP46100 2492 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 A0A0D9SEW6 157 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 CCDC66A2RUB6 948 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 TRABD2BA6NFA1 517 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 K7ERQ8 282 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 CBX4O00257 560 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 SMAD6O43541 496 aaKnown RBP11.76□□□□□ -0.53
HLA-C-206ENST00000470363 PSTPIP1O43586 416 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 SNAP91O60641 907 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 KRT1P04264 644 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 PYGMP11217 842 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 DESP17661 470 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 EPHA8P29322 1005 aaPredicted RBP11.76□□□□□ -0.53
HLA-C-206ENST00000470363 PCK1P35558 622 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 RWDD2BP57060 319 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 BNIP3Q12983 259 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 BRMS1LQ5PSV4 323 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 PIP5KL1Q5T9C9 394 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 NAPEPLDQ6IQ20 393 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 Q6ZVU0 165 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 SETD3Q86TU7 594 aaPredicted RBP11.76□□□□□ -0.53
HLA-C-206ENST00000470363 IQCHQ86VS3 1027 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 GALNT15Q8N3T1 639 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 TMEM145Q8NBT3 493 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 TMIEQ8NEW7 156 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 PIP4K2CQ8TBX8 421 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 OR8D1Q8WZ84 308 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 RNF34Q969K3 372 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 VOPP1Q96AW1 172 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 SKA1Q96BD8 255 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 SNRNP25Q9BV90 132 aaKnown RBP11.76□□□□□ -0.53
HLA-C-206ENST00000470363 SIK2Q9H0K1 926 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 WDCPQ9H6R7 721 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 AASDHPPTQ9NRN7 309 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms