RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 NRG1Q02297 640 aaPredicted RBP8.1□□□□□ -1.11
SMC4-212ENST00000470240 ZBTB17Q13105 803 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 SEPT6Q14141 434 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 CRTC2Q53ET0 693 aaPredicted RBP8.1□□□□□ -1.11
SMC4-212ENST00000470240 FAM72AQ5TYM5 149 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 KIAA0319Q5VV43 1072 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 SEL1L3Q68CR1 1132 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 TRIM68Q6AZZ1 485 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 GDF6Q6KF10 455 aaPredicted RBP8.1□□□□□ -1.11
SMC4-212ENST00000470240 FAM72DQ6L9T8 149 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 RGMBQ6NW40 437 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 PKN3Q6P5Z2 889 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 AAGABQ6PD74 315 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 CES3Q6UWW8 571 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 C16orf89Q6UX73 402 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 CXCL17Q6UXB2 119 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 ZYG11AQ6WRX3 759 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 AGMOQ6ZNB7 445 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 LRRC74BQ6ZQY2 392 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 KIAA0408Q6ZU52 694 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 GPRIN1Q7Z2K8 1008 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 TTC7BQ86TV6 843 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 FAM72BQ86X60 149 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 ULK2Q8IYT8 1036 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 UNC5BQ8IZJ1 945 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 ATP6V0D2Q8N8Y2 350 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 TDRD5Q8NAT2 981 aaKnown RBP8.1□□□□□ -1.11
SMC4-212ENST00000470240 RBM15BQ8NDT2 890 aaKnown RBP8.1□□□□□ -1.11
SMC4-212ENST00000470240 IPMKQ8NFU5 416 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 TTC8Q8TAM2 541 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 RSPH1Q8WYR4 309 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 CCDC126Q96EE4 140 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 ATXN7L3BQ96GX2 97 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 CELF6Q96J87 481 aaKnown RBP8.1□□□□□ -1.11
SMC4-212ENST00000470240 SUSD3Q96L08 255 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 ZIC5Q96T25 663 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 GPR22Q99680 433 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 THTPAQ9BU02 230 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 FICDQ9BVA6 458 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 OXCT2Q9BYC2 517 aaPredicted RBP8.1□□□□□ -1.11
SMC4-212ENST00000470240 ACE2Q9BYF1 805 aaPredicted RBP8.1□□□□□ -1.11
SMC4-212ENST00000470240 SIK2Q9H0K1 926 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 SP110Q9HB58 689 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 GLOD4Q9HC38 313 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 OLA1Q9NTK5 396 aaKnown RBP8.1□□□□□ -1.11
SMC4-212ENST00000470240 TMEM216Q9P0N5 145 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 EMCNQ9ULC0 261 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 LRCH1Q9Y2L9 728 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 ACOT9Q9Y305 439 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 RAP2CQ9Y3L5 183 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 LRRC42Q9Y546 428 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 NR2E3Q9Y5X4 410 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 PSAT1Q9Y617 370 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 SQORQ9Y6N5 450 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 SCN10AQ9Y5Y9 1956 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 MYO16Q9Y6X6 1858 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 TRPC5OSA6NMA1 111 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 KHNYNO15037 678 aaKnown RBP8.09□□□□□ -1.11
SMC4-212ENST00000470240 SEPT4O43236 478 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 SIN3BO75182 1162 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 LYPLA1O75608 230 aaPredicted RBP8.09□□□□□ -1.11
SMC4-212ENST00000470240 KRT36O76013 467 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 POMCP01189 267 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 CHRNA1P02708 482 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 C2P06681 752 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 THRAP10827 490 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 HOXB8P17481 243 aaPredicted RBP8.09□□□□□ -1.11
SMC4-212ENST00000470240 ADSLP30566 484 aaPredicted RBP8.09□□□□□ -1.11
SMC4-212ENST00000470240 HOXC13P31276 330 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 CD52P31358 61 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 CD151P48509 253 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 PAPOLAP51003 745 aaKnown RBP8.09□□□□□ -1.11
SMC4-212ENST00000470240 SLC5A3P53794 718 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 RAB10P61026 200 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 POU4F1Q01851 419 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 KLC1Q07866 573 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 MGAT3Q09327 533 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 CUL3Q13618 768 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 KHDC1Q4VXA5 237 aaKnown RBP8.09□□□□□ -1.11
SMC4-212ENST00000470240 CERCAMQ5T4B2 595 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 SNX30Q5VWJ9 437 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 KIAA0930Q6ICG6 404 aaPredicted RBP8.09□□□□□ -1.11
SMC4-212ENST00000470240 IRGCQ6NXR0 463 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 RFWD3Q6PCD5 774 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 CMC1Q7Z7K0 106 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 ZC3HC1Q86WB0 502 aaKnown RBP8.09□□□□□ -1.11
SMC4-212ENST00000470240 ZNF354CQ86Y25 554 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 SCN4BQ8IWT1 228 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 CNTN4Q8IWV2 1026 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 BBS5Q8N3I7 341 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 RTL3Q8N8U3 475 aaKnown RBP8.09□□□□□ -1.11
SMC4-212ENST00000470240 GSTCDQ8NEC7 633 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 MICAL1Q8TDZ2 1067 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 USP33Q8TEY7 942 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 ACDQ96AP0 544 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 MFSD3Q96ES6 412 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 FUBP3Q96I24 572 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMC4-212ENST00000470240 ELMO2Q96JJ3 720 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 FAR2Q96K12 515 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 FCRL2Q96LA5 508 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms