RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 NEMP1O14524 444 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 HGSO14964 777 aaPredicted RBP12.19□□□□□ -0.46
LSM2-209ENST00000470083 NKX2-8O15522 239 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 STX10O60499 249 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 CUTAO60888 179 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 ZNF821O75541 412 aaPredicted RBP12.19□□□□□ -0.46
LSM2-209ENST00000470083 CTSEP14091 401 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 GNLYP22749 145 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 RPL13P26373 211 aaKnown RBP12.19□□□□□ -0.46
LSM2-209ENST00000470083 DCTP40126 519 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 RPL34P49207 117 aaKnown RBP12.19□□□□□ -0.46
LSM2-209ENST00000470083 CDC20Q12834 499 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 STILQ15468 1287 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 EFHC2Q5JST6 749 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 CACNA2D3Q8IZS8 1091 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 DCAF4L2Q8NA75 395 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 GALNT11Q8NCW6 608 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 RAB7BQ96AH8 199 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 ZSWIM1Q9BR11 485 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 POPDC2Q9HBU9 364 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 VANGL2Q9ULK5 521 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 ITPR3Q14573 2671 aa12.19□□□□□ -0.46
LSM2-209ENST00000470083 ZFHX3Q15911 3703 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 SEMA7AO75326 666 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 ENDOD1O94919 500 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 RASGRP1O95267 797 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 PRKCGP05129 697 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 PRKAR1AP10644 381 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 SYT1P21579 422 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 CCR1P32246 355 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 ABL2P42684 1182 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 CDH4P55283 916 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 PITX1P78337 314 aaPredicted RBP12.18□□□□□ -0.46
LSM2-209ENST00000470083 SEPT6Q14141 434 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 TCEA2Q15560 299 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 ALG11Q2TAA5 492 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 MAP9Q49MG5 647 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 LINGO4Q6UY18 593 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 VPS36Q86VN1 386 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 HID1Q8IV36 788 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 TEX19Q8NA77 164 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 PMEPA1Q969W9 287 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 HEPHQ9BQS7 1158 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 C1QTNF7Q9BXJ2 289 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 GGT7Q9UJ14 662 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 ITM2BQ9Y287 266 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 TP53TG5Q9Y2B4 290 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 UNC13CQ8NB66 2214 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 SDK2Q58EX2 2172 aa12.18□□□□□ -0.46
LSM2-209ENST00000470083 DUX1O43812 170 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 RAD1O60671 282 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 CPNE6O95741 557 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 DDAH2O95865 285 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 RHOCP08134 193 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 FGF3P11487 239 aaPredicted RBP12.17□□□□□ -0.46
LSM2-209ENST00000470083 TBXAS1P24557 533 aaPredicted RBP12.17□□□□□ -0.46
LSM2-209ENST00000470083 BRD2P25440 801 aaKnown RBP12.17□□□□□ -0.46
LSM2-209ENST00000470083 ACADSBP45954 432 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 PEX5P50542 639 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 MTA1Q13330 715 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 ADAM9Q13443 819 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 C5orf22Q49AR2 442 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 OGFOD3Q6PK18 319 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 TMEM270Q6UE05 265 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 MAMDC2Q7Z304 686 aaPredicted RBP12.17□□□□□ -0.46
LSM2-209ENST00000470083 PIM3Q86V86 326 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 HEATR4Q86WZ0 1026 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 CEP57L1Q8IYX8 460 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 PCDH20Q8N6Y1 951 aaKnown RBP12.17□□□□□ -0.46
LSM2-209ENST00000470083 TSACCQ96A04 125 aaPredicted RBP12.17□□□□□ -0.46
LSM2-209ENST00000470083 ARHGEF26Q96DR7 871 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 HAPLN3Q96S86 360 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 DDA1Q9BW61 102 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 CEP44Q9C0F1 390 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 ZSCAN16Q9H4T2 348 aaPredicted RBP12.17□□□□□ -0.46
LSM2-209ENST00000470083 FAM204AQ9H8W3 233 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 PRDM8Q9NQV8 689 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 ST7Q9NRC1 585 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 LRIT1Q9P2V4 623 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 COQ4Q9Y3A0 265 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 B3GALT1Q9Y5Z6 326 aa12.17□□□□□ -0.46
LSM2-209ENST00000470083 C16orf96A6NNT2 1141 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 EFCAB7A8K855 629 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 TMEM110-MUSTN1A8MSY1 372 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 NUDT21O43809 227 aaKnown RBP12.16□□□□□ -0.46
LSM2-209ENST00000470083 YEATS4O95619 227 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 COL8A1P27658 744 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 OAS2P29728 719 aaKnown RBP12.16□□□□□ -0.46
LSM2-209ENST00000470083 GGCXP38435 758 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 SERPINH1P50454 418 aaKnown RBP12.16□□□□□ -0.46
LSM2-209ENST00000470083 CCNHP51946 323 aaPredicted RBP12.16□□□□□ -0.46
LSM2-209ENST00000470083 YWHAZP63104 245 aaKnown RBP12.16□□□□□ -0.46
LSM2-209ENST00000470083 ARHGEF7Q14155 803 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 HLTFQ14527 1009 aaKnown RBP eCLIP12.16□□□□□ -0.46
LSM2-209ENST00000470083 CLPPQ16740 277 aaPredicted RBP12.16□□□□□ -0.46
LSM2-209ENST00000470083 ARHGAP44Q17R89 818 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 DEFB109BQ30KR1 87 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 CBWD6Q4V339 395 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 C14orf28Q4W4Y0 310 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 CARD16Q5EG05 197 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms