RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 IGLON5A6NGN9 336 aa17.75■□□□□ 0.43
COL7A1-208ENST00000470076 SIGLEC16A6NMB1 481 aa17.75■□□□□ 0.43
COL7A1-208ENST00000470076 RRP8O43159 456 aaKnown RBP17.75■□□□□ 0.43
COL7A1-208ENST00000470076 TLX3O43711 291 aaPredicted RBP17.75■□□□□ 0.43
COL7A1-208ENST00000470076 MT-CO3P00414 261 aa17.75■□□□□ 0.43
COL7A1-208ENST00000470076 UGT2B4P06133 528 aa17.75■□□□□ 0.43
COL7A1-208ENST00000470076 GP1BAP07359 652 aa17.75■□□□□ 0.43
COL7A1-208ENST00000470076 SNIP1Q8TAD8 396 aaKnown RBP17.75■□□□□ 0.43
COL7A1-208ENST00000470076 BAP1Q92560 729 aa17.75■□□□□ 0.43
COL7A1-208ENST00000470076 GDAP1L1Q96MZ0 367 aa17.75■□□□□ 0.43
COL7A1-208ENST00000470076 LIMA1Q9UHB6 759 aaKnown RBP17.75■□□□□ 0.43
COL7A1-208ENST00000470076 CSNK1G3Q9Y6M4 447 aa17.75■□□□□ 0.43
COL7A1-208ENST00000470076 BPTFQ12830 3046 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 LGALS16A8MUM7 142 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 K7ESM1 405 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 RIOK3O14730 519 aaKnown RBP17.74■□□□□ 0.43
COL7A1-208ENST00000470076 BUB1O43683 1085 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 OPA1O60313 960 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 EPHB2P29323 1055 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 YBEYP58557 167 aaPredicted RBP17.74■□□□□ 0.43
COL7A1-208ENST00000470076 RAD51Q06609 339 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 C1QBPQ07021 282 aaKnown RBP17.74■□□□□ 0.43
COL7A1-208ENST00000470076 PDE1CQ14123 709 aaPredicted RBP17.74■□□□□ 0.43
COL7A1-208ENST00000470076 INO80DQ53TQ3 878 aaPredicted RBP17.74■□□□□ 0.43
COL7A1-208ENST00000470076 EFHC2Q5JST6 749 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 ZCCHC8Q6NZY4 707 aaKnown RBP17.74■□□□□ 0.43
COL7A1-208ENST00000470076 GDPD4Q6W3E5 623 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 KDM7AQ6ZMT4 941 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 LEKR1Q6ZMV7 388 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 MON1BQ7L1V2 547 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 ZNF354CQ86Y25 554 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 RTL3Q8N8U3 475 aaKnown RBP17.74■□□□□ 0.43
COL7A1-208ENST00000470076 ZNF548Q8NEK5 533 aaPredicted RBP17.74■□□□□ 0.43
COL7A1-208ENST00000470076 FGF11Q92914 225 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 VOPP1Q96AW1 172 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 KLHL32Q96NJ5 620 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 TTYH3Q9C0H2 523 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 CAAP1Q9H8G2 361 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 SEPT11Q9NVA2 429 aaKnown RBP17.74■□□□□ 0.43
COL7A1-208ENST00000470076 ANO10Q9NW15 660 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 NCKIPSDQ9NZQ3 722 aa17.74■□□□□ 0.43
COL7A1-208ENST00000470076 AREL1O15033 823 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 SPINT1O43278 529 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 BRINP1O60477 761 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 NEBLO76041 1014 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 TMCC1O94876 653 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 IGSF6O95976 241 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 ITPKBP27987 946 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 ACTN2P35609 894 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 ZNF143P52747 638 aaPredicted RBP17.73■□□□□ 0.43
COL7A1-208ENST00000470076 AIF1P55008 147 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 PFN3P60673 137 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 MYL5Q02045 173 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 UBXN1Q04323 297 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 ATXN7L2Q5T6C5 722 aaPredicted RBP17.73■□□□□ 0.43
COL7A1-208ENST00000470076 CDCP2Q5VXM1 449 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 DNAJC24Q6P3W2 148 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 SCYL2Q6P3W7 929 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 SASS6Q6UVJ0 657 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 TTC7BQ86TV6 843 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 CRELD1Q96HD1 420 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 DEPDC7Q96QD5 511 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 ERGIC2Q96RQ1 377 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 EPAS1Q99814 870 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 NOL6Q9H6R4 1146 aaKnown RBP17.73■□□□□ 0.43
COL7A1-208ENST00000470076 GGT7Q9UJ14 662 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 ITM2BQ9Y287 266 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 MFHAS1Q9Y4C4 1052 aa17.73■□□□□ 0.43
COL7A1-208ENST00000470076 LY6G6EA0A0G2JKS1 128 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 TCRBV5S1A1TA0A578 114 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 LRRC10BA6NIK2 292 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 CCP110O43303 1012 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 AQP9O43315 295 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 JUNDP17535 347 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 THOP1P52888 689 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 RHOAP61586 193 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 PTK2BQ14289 1009 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 PARP15Q460N3 678 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 PYROXD2Q8N2H3 581 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 BTN2A2Q8WVV5 523 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 CENPTQ96BT3 561 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 AGPAT1Q99943 283 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 CNPY3Q9BT09 278 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 C1QTNF7Q9BXJ2 289 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 ABCG4Q9H172 646 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 CATSPERBQ9H7T0 1116 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 DKK3Q9UBP4 350 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 U3KQA8 63 aa17.72■□□□□ 0.43
COL7A1-208ENST00000470076 SHROOM3Q8TF72 1996 aa17.71■□□□□ 0.43
COL7A1-208ENST00000470076 WASH4PA8MWX3 477 aa17.71■□□□□ 0.43
COL7A1-208ENST00000470076 TOR1BO14657 336 aa17.71■□□□□ 0.43
COL7A1-208ENST00000470076 TPP1O14773 563 aa17.71■□□□□ 0.43
COL7A1-208ENST00000470076 CREB3O43889 395 aa17.71■□□□□ 0.43
COL7A1-208ENST00000470076 TM7SF2O76062 418 aa17.71■□□□□ 0.43
COL7A1-208ENST00000470076 CCDC172P0C7W6 258 aa17.71■□□□□ 0.43
COL7A1-208ENST00000470076 DESP17661 470 aa17.71■□□□□ 0.43
COL7A1-208ENST00000470076 CDK11BP21127 795 aaKnown RBP17.71■□□□□ 0.43
COL7A1-208ENST00000470076 SUOXP51687 545 aa17.71■□□□□ 0.43
COL7A1-208ENST00000470076 YPEL5P62699 121 aa17.71■□□□□ 0.43
COL7A1-208ENST00000470076 STX1AQ16623 288 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms