RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 OR51B4Q9Y5P0 310 aa18.35■□□□□ 0.53
SMC4-211ENST00000469858 TMCC1O94876 653 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 CD160O95971 181 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 CYBBP04839 570 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 PYGBP11216 843 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 CEBPBP17676 345 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 NRIP1P48552 1158 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 FRG1Q14331 258 aaKnown RBP18.34■□□□□ 0.53
SMC4-211ENST00000469858 SIRPB2Q5JXA9 342 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 MPP7Q5T2T1 576 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 C12orf76Q8N812 135 aaPredicted RBP18.34■□□□□ 0.53
SMC4-211ENST00000469858 PTCD2Q8WV60 388 aaKnown RBP18.34■□□□□ 0.53
SMC4-211ENST00000469858 MTBPQ96DY7 904 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 ALG14Q96F25 216 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 SGSM3Q96HU1 749 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 AGAP2Q99490 1192 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 FAM107BQ9H098 131 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 NOD2Q9HC29 1040 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 SSU72Q9NP77 194 aaKnown RBP18.34■□□□□ 0.53
SMC4-211ENST00000469858 VPS51Q9UID3 782 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 CLEC4EQ9ULY5 219 aa18.34■□□□□ 0.53
SMC4-211ENST00000469858 LOC285095A0A1B0GVY8 99 aa18.33■□□□□ 0.53
SMC4-211ENST00000469858 HMX2A2RU54 273 aa18.33■□□□□ 0.53
SMC4-211ENST00000469858 GMNCA6NCL1 334 aa18.33■□□□□ 0.53
SMC4-211ENST00000469858 GOLGA8TH3BQL2 631 aa18.33■□□□□ 0.53
SMC4-211ENST00000469858 ATXN1LP0C7T5 689 aaKnown RBP18.33■□□□□ 0.53
SMC4-211ENST00000469858 ADRA1DP25100 572 aa18.33■□□□□ 0.53
SMC4-211ENST00000469858 CDK18Q07002 472 aa18.33■□□□□ 0.53
SMC4-211ENST00000469858 CBX2Q14781 532 aaPredicted RBP18.33■□□□□ 0.53
SMC4-211ENST00000469858 ESRP1Q6NXG1 681 aaKnown RBP18.33■□□□□ 0.53
SMC4-211ENST00000469858 APCDD1Q8J025 514 aa18.33■□□□□ 0.53
SMC4-211ENST00000469858 BANPQ8N9N5 519 aa18.33■□□□□ 0.53
SMC4-211ENST00000469858 DCAF4L2Q8NA75 395 aa18.33■□□□□ 0.53
SMC4-211ENST00000469858 SMG7Q92540 1137 aaKnown RBP18.33■□□□□ 0.53
SMC4-211ENST00000469858 ALKBH8Q96BT7 664 aaKnown RBP18.33■□□□□ 0.53
SMC4-211ENST00000469858 FEM1CQ96JP0 617 aa18.33■□□□□ 0.53
SMC4-211ENST00000469858 ZSWIM3Q96MP5 696 aa18.33■□□□□ 0.53
SMC4-211ENST00000469858 PAIP2Q9BPZ3 127 aaKnown RBP18.33■□□□□ 0.53
SMC4-211ENST00000469858 MRM3Q9HC36 420 aaKnown RBP18.33■□□□□ 0.53
SMC4-211ENST00000469858 SCUBE2Q9NQ36 999 aa18.33■□□□□ 0.53
SMC4-211ENST00000469858 MRPS23Q9Y3D9 190 aaKnown RBP18.33■□□□□ 0.53
SMC4-211ENST00000469858 C2orf16Q68DN1 1984 aa18.33■□□□□ 0.52
SMC4-211ENST00000469858 CCDC85CA6NKD9 419 aa18.33■□□□□ 0.52
SMC4-211ENST00000469858 SRRM3A6NNA2 597 aaPredicted RBP18.33■□□□□ 0.52
SMC4-211ENST00000469858 ZNF197O14709 1029 aa18.33■□□□□ 0.52
SMC4-211ENST00000469858 INSIG1O15503 277 aa18.33■□□□□ 0.52
SMC4-211ENST00000469858 CR2P20023 1033 aa18.33■□□□□ 0.52
SMC4-211ENST00000469858 CNTFP26441 200 aa18.33■□□□□ 0.52
SMC4-211ENST00000469858 LMAN2Q12907 356 aa18.33■□□□□ 0.52
SMC4-211ENST00000469858 GALNT3Q14435 633 aa18.33■□□□□ 0.52
SMC4-211ENST00000469858 TEDDM1Q5T9Z0 273 aa18.33■□□□□ 0.52
SMC4-211ENST00000469858 ABHD8Q96I13 439 aa18.33■□□□□ 0.52
SMC4-211ENST00000469858 CPNE1Q99829 537 aa18.33■□□□□ 0.52
SMC4-211ENST00000469858 IARS2Q9NSE4 1012 aaKnown RBP18.33■□□□□ 0.52
SMC4-211ENST00000469858 PRKAG3Q9UGI9 489 aa18.33■□□□□ 0.52
SMC4-211ENST00000469858 SLC2A6Q9UGQ3 507 aa18.33■□□□□ 0.52
SMC4-211ENST00000469858 F7P08709 466 aaPredicted RBP18.32■□□□□ 0.52
SMC4-211ENST00000469858 GP5P40197 560 aa18.32■□□□□ 0.52
SMC4-211ENST00000469858 SLC18A1P54219 525 aa18.32■□□□□ 0.52
SMC4-211ENST00000469858 WDR4P57081 412 aaKnown RBP18.32■□□□□ 0.52
SMC4-211ENST00000469858 FYB2Q5VWT5 728 aa18.32■□□□□ 0.52
SMC4-211ENST00000469858 PDPK2PQ6A1A2 396 aa18.32■□□□□ 0.52
SMC4-211ENST00000469858 TMC5Q6UXY8 1006 aa18.32■□□□□ 0.52
SMC4-211ENST00000469858 NSMCE3Q96MG7 304 aa18.32■□□□□ 0.52
SMC4-211ENST00000469858 C2orf49Q9BVC5 232 aaPredicted RBP18.32■□□□□ 0.52
SMC4-211ENST00000469858 MSRAQ9UJ68 235 aa18.32■□□□□ 0.52
SMC4-211ENST00000469858 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.31■□□□□ 0.52
SMC4-211ENST00000469858 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.31■□□□□ 0.52
SMC4-211ENST00000469858 HEATR9A2RTY3 570 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 SOBPA7XYQ1 873 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 NDUFAB1O14561 156 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 RFPL1O75677 317 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 POU2F2P09086 479 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 HLA-DPA1P20036 260 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 CD70P32970 193 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 SLC18A2Q05940 514 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 ZNF77Q15935 545 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 DUSP6Q16828 381 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 SH2D5Q6ZV89 423 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 STRA8Q7Z7C7 330 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 FIBINQ8TAL6 211 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 ITFG1Q8TB96 612 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 TCP10LQ8TDR4 215 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 DENND1AQ8TEH3 1009 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 APOPT1Q96IL0 206 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 CCDC134Q9H6E4 229 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 KIAA1522Q9P206 1035 aaPredicted RBP18.31■□□□□ 0.52
SMC4-211ENST00000469858 FCF1Q9Y324 198 aaKnown RBP18.31■□□□□ 0.52
SMC4-211ENST00000469858 EPOPA6NHQ4 379 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 ZWINTO95229 277 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 VAPBO95292 243 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 FGF1P05230 155 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 ITGA2BP08514 1039 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 PAMP19021 973 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 RHOAP61586 193 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 MSLNQ13421 630 aaPredicted RBP18.31■□□□□ 0.52
SMC4-211ENST00000469858 SEPT7Q16181 437 aaKnown RBP18.31■□□□□ 0.52
SMC4-211ENST00000469858 CNGA3Q16281 694 aa18.31■□□□□ 0.52
SMC4-211ENST00000469858 INO80DQ53TQ3 878 aaPredicted RBP18.31■□□□□ 0.52
SMC4-211ENST00000469858 TMEM25Q86YD3 366 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms